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L2_039_239G1_scaffold_342

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_342_1
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(175..1137)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RMS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50218.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L2_039_239G1_scaffold_342_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1495..2049
DNA (555bp) protein (185aa)
Protein BioY n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMS4_9CLOT
Protein BioY {ECO:0000313|EMBL:CDD44664.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
bioY; putative biotin transporter BioY
L2_039_239G1_scaffold_342_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2068..2763
DNA (696bp) protein (232aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEU1_9CLOT
L2_039_239G1_scaffold_342_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2760..3959
DNA (1200bp) protein (400aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUB5_9CLOT
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme {ECO:0000313|EMBL:CDD44666.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_5
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4096..5415)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F866_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01245.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
sodium/glutamate symporter
L2_039_239G1_scaffold_342_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5551..6522)
DNA (972bp) protein (324aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQ58_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD44697.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L2_039_239G1_scaffold_342_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6768..7469
DNA (702bp) protein (234aa)
Demethylmenaquinone methyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8N5_9CLOT
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:CDD44698.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Demethylmenaquinone methyltransferase
L2_039_239G1_scaffold_342_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7566..8225)
DNA (660bp) protein (220aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMV6_9CLOT
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8240..9613)
DNA (1374bp) protein (458aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEW3_9CLOT
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9614..11383)
DNA (1770bp) protein (590aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUF1_9CLOT
L2_039_239G1_scaffold_342_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11443..11763)
DNA (321bp) protein (107aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
ATP synthase subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8P8_9CLOT
ATP synthase subunit {ECO:0000313|EMBL:CDD44713.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11756..12730)
DNA (975bp) protein (325aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
Putative ATP synthase subunit C n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEX3_9CLOT
Putative ATP synthase subunit C {ECO:0000313|EMBL:CDD44715.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12742..13341)
DNA (600bp) protein (200aa)
Archaeal/vacuolar-type H+-ATPase subunit E (EC:3.6.3.14)
V-type proton ATPase subunit E n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQ71_9CLOT
V-type proton ATPase subunit E {ECO:0000313|EMBL:CDD44717.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13419..13892)
DNA (474bp) protein (158aa)
ATP synthase subunit C. (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8Q2_9CLOT
ATP synthase subunit C {ECO:0000313|EMBL:CDD44718.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13896..15908)
DNA (2013bp) protein (671aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Archaeal/vacuolar-type H+-ATPase subunit I n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMX1_9CLOT
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15947..16261)
DNA (315bp) protein (105aa)
atpH; H(+)-transporting two-sector ATPase subunit H.a (A-type ATP synthase) (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQ77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44722.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16724..18682
DNA (1959bp) protein (653aa)
Transcriptional regulator sigma-54-dependent n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMX6_9CLOT
Transcriptional regulator sigma-54-dependent {ECO:0000313|EMBL:CDD44724.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
stc1; signal-transduction and transcriptional-control protein
L2_039_239G1_scaffold_342_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19097..19825
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44726.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted glutamine amidotransferases
L2_039_239G1_scaffold_342_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19861..21240
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQ82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44727.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_342_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21258..22475
DNA (1218bp) protein (406aa)
amidohydrolase (EC:3.5.1.32)
M20D family Peptidase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMY1_9CLOT
M20D family Peptidase {ECO:0000313|EMBL:CDD44729.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22566..23288)
DNA (723bp) protein (241aa)
Transcriptional regulator MerR family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZF00_9CLOT
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDD44740.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted transcriptional regulators
L2_039_239G1_scaffold_342_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23590..24921)
DNA (1332bp) protein (444aa)
primary replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUI9_9CLOT
Primary replicative DNA helicase {ECO:0000313|EMBL:CDD44741.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_342_23
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24924..25370)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium sp. CAG:149 RepID=R5M2J4_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
LSU ribosomal protein L9P
L2_039_239G1_scaffold_342_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25372..27432)
DNA (2061bp) protein (687aa)
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUK5_9CLOT
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain {ECO:0000313|EMBL:CDD44761.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
L2_039_239G1_scaffold_342_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27786..29132
DNA (1347bp) protein (449aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Phosphomethylpyrimidine synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQC0_9CLOT
hydroxymethylpyrimidine synthase
L2_039_239G1_scaffold_342_26
unknown

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29158..29394
DNA (237bp) protein (79aa)

This feature has no annotations

L2_039_239G1_scaffold_342_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29332..29946)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44763.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_342_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30088..31449)
DNA (1362bp) protein (454aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN14_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CDD44764.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
putative efflux protein, MATE family
L2_039_239G1_scaffold_342_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31536..32354)
DNA (819bp) protein (273aa)
Ribokinase family Sugar kinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZF28_9CLOT
Ribokinase family Sugar kinase {ECO:0000313|EMBL:CDD44765.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Sugar kinases, ribokinase family
L2_039_239G1_scaffold_342_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32536..33264)
DNA (729bp) protein (243aa)
Transcriptional regulator GntR family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUK8_9CLOT
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDD44766.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator, GntR family
Displaying items 1-30 of 44 in total

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