ggKbase home page

L2_039_239G1_scaffold_432

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_432_1
unknown

Not on your lists

1..297
DNA (297bp) protein (99aa)

This feature has no annotations

L2_039_239G1_scaffold_432_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(219..1253)
DNA (1035bp) protein (345aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DGK4_CLOSC
ABC-type Fe3+ transport system, periplasmic component
ABC-type Fe3+ transport system, periplasmic component {ECO:0000313|EMBL:CBK76828.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_039_239G1_scaffold_432_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1313..2932)
DNA (1620bp) protein (540aa)
ABC-type Fe3+ transport system permease component n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQE9_9CLOT
ABC-type Fe3+ transport system permease component {ECO:0000313|EMBL:CDD38208.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type Fe3+ transport system, permease component
L2_039_239G1_scaffold_432_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2934..3752)
DNA (819bp) protein (273aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
ABC-type spermidine/putrescine transport systems ATPase components n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWB5_9CLOT
ABC-type spermidine/putrescine transport systems ATPase components {ECO:0000313|EMBL:CDD38210.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_432_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3991..4233)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38211.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_432_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4350..4655)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37890.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_432_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5052..7646)
DNA (2595bp) protein (865aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN55_9CLOT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ATP-dependent chaperone ClpB
L2_039_239G1_scaffold_432_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8014..9369
DNA (1356bp) protein (452aa)
TRAP transporter DctM-like membrane protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZF87_9CLOT
TRAP transporter DctM-like membrane protein {ECO:0000313|EMBL:CDD44815.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
C4-dicarboxylate ABC transporter permease
L2_039_239G1_scaffold_432_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9373..9597
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44816.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_432_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9605..10567)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44817.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L2_039_239G1_scaffold_432_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10686..11696
DNA (1011bp) protein (337aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
Putative 4-hydroxy-2-oxovalerate aldolase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8Z6_9CLOT
Putative 4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:CDD44818.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_432_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11729..12697
DNA (969bp) protein (323aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44819.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_432_13
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12767..13774)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YNL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65971.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
permease
L2_039_239G1_scaffold_432_14
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13794..14030)
DNA (237bp) protein (79aa)
Redox-active disulfide protein 2 n=2 Tax=unclassified Lachnospiraceae RepID=E9RVA8_9FIRM
Redox-active disulfide protein 2 {ECO:0000313|EMBL:EGC74918.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
small redox-active disulfide protein 2
L2_039_239G1_scaffold_432_15
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14088..15032)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZPY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65969.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
CobW/P47K family protein
L2_039_239G1_scaffold_432_16
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15102..15446)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YNC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86319.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ArsR family transcriptional regulator
L2_039_239G1_scaffold_432_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15655..16194)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZF92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44820.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted small molecule binding protein (contains 3H domain)
L2_039_239G1_scaffold_432_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16244..17113)
DNA (870bp) protein (290aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUR2_9CLOT
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:CDD44821.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_432_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17162..18331)
DNA (1170bp) protein (390aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQI5_9CLOT
FAD binding domain protein {ECO:0000313|EMBL:CDD44822.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_432_20
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18411..19322)
DNA (912bp) protein (304aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Quinolinate synthetase complex, A subunit n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z362_9FIRM
nadA; Quinolinate synthetase A
L2_039_239G1_scaffold_432_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19453..21048)
DNA (1596bp) protein (532aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQJ7_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD44832.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_039_239G1_scaffold_432_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21514..22146)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z909_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44833.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_432_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22177..23679)
DNA (1503bp) protein (501aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN76_9CLOT
L2_039_239G1_scaffold_432_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23809..24537)
DNA (729bp) protein (243aa)
HAD superfamily (subfamily IA) hydrolase, TIGR02254 (EC:3.8.1.2)
HAD hydrolase TIGR02254 family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFB1_9CLOT
HAD hydrolase TIGR02254 family {ECO:0000313|EMBL:CDD44835.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_432_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24534..25820)
DNA (1287bp) protein (429aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUS8_9CLOT
L2_039_239G1_scaffold_432_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25838..26215)
DNA (378bp) protein (126aa)
Lactoylglutathione lyase and related lyases (EC:4.4.1.5)
Lactoylglutathione lyase and related lyases n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQK4_9CLOT
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CDD44837.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_432_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26212..26916)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z913_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44838.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_432_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26959..27360)
DNA (402bp) protein (134aa)
Thioesterase superfamily n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN81_9CLOT
Thioesterase superfamily {ECO:0000313|EMBL:CDD44839.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Thioesterase superfamily
L2_039_239G1_scaffold_432_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27409..27786)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44840.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_432_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27964..28584
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44841.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator
Displaying items 1-30 of 37 in total

View Taxonomy