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L2_039_362G1_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_21_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18..434)
DNA (417bp) protein (139aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YR85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55052.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_362G1_scaffold_21_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

632..1444
DNA (813bp) protein (271aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR87_9FIRM
L2_039_362G1_scaffold_21_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1530..1973
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM49940.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_039_362G1_scaffold_21_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2258..4006
DNA (1749bp) protein (583aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR89_9FIRM
L2_039_362G1_scaffold_21_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4259..5536
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55057.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_362G1_scaffold_21_6

Not on your lists

comp(5707..5961)
DNA (255bp) protein (85aa)
sugar ABC transporter permease n=1 Tax=Clostridium difficile RepID=UPI00035D3B2E
Protease {ECO:0000313|EMBL:EKC78433.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_039_362G1_scaffold_21_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6833..8080
DNA (1248bp) protein (416aa)
Homocysteine S-methyltransferase n=3 Tax=Clostridiales RepID=G9YUK5_9FIRM
Homocysteine S-methyltransferase {ECO:0000313|EMBL:ERI78937.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_039_362G1_scaffold_21_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8299..10620
DNA (2322bp) protein (774aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4G2_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KGF55059.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_362G1_scaffold_21_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10706..11911
DNA (1206bp) protein (402aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
Putative 23S rRNA m5C1962 methyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26665.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_362G1_scaffold_21_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11967..12494
DNA (528bp) protein (176aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Clostridiales RepID=H1CJY1_9FIRM
anaerobic ribonucleoside-triphosphate reductase activating protein
L2_039_362G1_scaffold_21_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12650..12871)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YUL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22623.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_362G1_scaffold_21_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12940..13170
DNA (231bp) protein (77aa)
DNA-binding helix-turn-helix protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUL2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHM42006.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
XRE family transcriptional regulator
L2_039_362G1_scaffold_21_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13157..13780
DNA (624bp) protein (208aa)
cat-1; chloramphenicol acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUL3_9FIRM
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EHM42007.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_362G1_scaffold_21_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13777..14388
DNA (612bp) protein (204aa)
Hydrolase, NUDIX family n=2 Tax=Clostridiales RepID=U2DBT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22626.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative hydrolase
L2_039_362G1_scaffold_21_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14385..15032
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22627.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative methyltransferase
L2_039_362G1_scaffold_21_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15038..15883
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Clostridiales RepID=H1CLU0_9FIRM
putative methyltransferase
L2_039_362G1_scaffold_21_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16064..16306)
DNA (243bp) protein (81aa)
Transcriptional regulator, AbrB family n=3 Tax=Clostridiales RepID=G9YUL8_9FIRM
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ERI78931.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
AbrB family transcriptional regulator
L2_039_362G1_scaffold_21_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16536..17114
DNA (579bp) protein (193aa)
Putative spore maturation protein A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUL9_9FIRM
Putative spore maturation protein A {ECO:0000313|EMBL:EHM42013.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
spmA; spore maturation protein A
L2_039_362G1_scaffold_21_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17117..17638
DNA (522bp) protein (174aa)
Putative spore maturation protein B n=3 Tax=Clostridiales RepID=G9YUM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55027.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spmB; spore maturation protein B
L2_039_362G1_scaffold_21_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17716..17925)
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42015.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_039_362G1_scaffold_21_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17956..19143)
DNA (1188bp) protein (396aa)
Sporulation integral membrane protein YlbJ n=3 Tax=Clostridiales RepID=H1CLU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55029.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
nucleoside recognition
L2_039_362G1_scaffold_21_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19282..19659
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55030.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative Cytosolic Protein
L2_039_362G1_scaffold_21_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19666..20292
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CLU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22635.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_362G1_scaffold_21_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20520..21116)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22636.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TetR family transcriptional regulator
L2_039_362G1_scaffold_21_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21216..22091
DNA (876bp) protein (292aa)
EDD domain protein, DegV family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAY1_9CLOT
EDD domain protein, DegV family {ECO:0000313|EMBL:ERI62969.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
DegV family protein
L2_039_362G1_scaffold_21_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22130..23203)
DNA (1074bp) protein (358aa)
Peptidase, M24 family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUM7_9FIRM
Peptidase, M24 family {ECO:0000313|EMBL:EHM42021.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Xaa-Pro aminopeptidase
L2_039_362G1_scaffold_21_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23305..25059)
DNA (1755bp) protein (585aa)
hndD; NADP-reducing hydrogenase subunit HndC (EC:1.12.1.3)
Putative ferredoxin hydrogenase HydA1 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUM8_9FIRM
Putative ferredoxin hydrogenase HydA1 {ECO:0000313|EMBL:EHM42022.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_362G1_scaffold_21_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25074..26876)
DNA (1803bp) protein (601aa)
hndC; NADP-reducing hydrogenase subunit HndC (EC:1.12.1.3)
Protein HymB n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUM9_9FIRM
Protein HymB {ECO:0000313|EMBL:EHM42023.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_362G1_scaffold_21_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26890..27258)
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YUN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42024.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_039_362G1_scaffold_21_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27263..27814)
DNA (552bp) protein (184aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAX7_9CLOT
hypothetical protein
Displaying items 1-30 of 74 in total

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