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L2_039_362G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_42_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33..1352)
DNA (1320bp) protein (440aa)
MATE efflux family protein n=2 Tax=Clostridiales RepID=G9YRA5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERI65226.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
MATE efflux family protein
L2_039_362G1_scaffold_42_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1510..2724
DNA (1215bp) protein (405aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=3 Tax=Clostridiales RepID=G9YRA6_9FIRM
L2_039_362G1_scaffold_42_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2869..3240
DNA (372bp) protein (124aa)
Putative endoribonuclease L-PSP n=3 Tax=Clostridiales RepID=G9YRA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33617.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
endoribonuclease L-PSP
L2_039_362G1_scaffold_42_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3306..4529
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CD49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33618.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4533..5987
DNA (1455bp) protein (485aa)
Na+/H+ antiporter family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55200.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6027..6695)
DNA (669bp) protein (223aa)
YheO-like protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CD04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF55201.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6957..7550
DNA (594bp) protein (198aa)
Putative rubrerythrin n=3 Tax=Clostridiales RepID=G9YRB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33621.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Rubrerythrin
L2_039_362G1_scaffold_42_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7787..9145
DNA (1359bp) protein (453aa)
TIGR00366 family protein n=2 Tax=Clostridiales RepID=G9YRB2_9FIRM
TIGR00366 family protein {ECO:0000313|EMBL:EHM49879.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
TIGR00366 family protein
L2_039_362G1_scaffold_42_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9267..10196)
DNA (930bp) protein (310aa)
Transporter, auxin efflux carrier family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CCS8_9CLOT
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERI65176.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted permeases
L2_039_362G1_scaffold_42_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10344..10769
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55205.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10790..11362)
DNA (573bp) protein (191aa)
HDIG domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWQ1_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EHM38452.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
HD domain-containing protein
L2_039_362G1_scaffold_42_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11365..11802)
DNA (438bp) protein (146aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YWQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55207.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11799..12002)
DNA (204bp) protein (68aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YWQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33627.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
L2_039_362G1_scaffold_42_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12227..12763)
DNA (537bp) protein (179aa)
HD domain protein n=2 Tax=Clostridiales RepID=G9YWQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33628.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
metal dependent phophohydrolase
L2_039_362G1_scaffold_42_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12876..13772)
DNA (897bp) protein (299aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
tRNA dimethylallyltransferase n=2 Tax=Clostridiales RepID=G9YWQ6_9FIRM
tRNA delta(2)-isopentenylpyrophosphate transferase
L2_039_362G1_scaffold_42_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13867..15993)
DNA (2127bp) protein (709aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CD61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33630.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
5'-nucleotidase
L2_039_362G1_scaffold_42_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16120..17811)
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CD62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33631.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18285..19073)
DNA (789bp) protein (263aa)
B12 binding domain protein n=2 Tax=Clostridiales RepID=U2C793_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO33632.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19070..20635)
DNA (1566bp) protein (522aa)
D-Lysine 5,6-aminomutase alpha subunit n=3 Tax=Clostridiales RepID=G9YTR5_9FIRM
D-Lysine 5,6-aminomutase alpha subunit {ECO:0000313|EMBL:ERI65143.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_039_362G1_scaffold_42_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20725..21978)
DNA (1254bp) protein (418aa)
Lysine-2,3-aminomutase n=3 Tax=Clostridiales RepID=G9YTR6_9FIRM
L-lysine 2,3-aminomutase {ECO:0000313|EMBL:EHO33634.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
kamA; l-lysine 2,3-aminomutase
L2_039_362G1_scaffold_42_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22351..23391)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YTR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33635.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23476..24294)
DNA (819bp) protein (273aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YTR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33636.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24734..26233)
DNA (1500bp) protein (500aa)
MutS domain V protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTS0_9FIRM
MutS domain V protein {ECO:0000313|EMBL:EHM43678.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_039_362G1_scaffold_42_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26236..27234)
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22025.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_362G1_scaffold_42_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28130..28462)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YTS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI77857.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein predicted by Glimmer/Critica
L2_039_362G1_scaffold_42_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28606..29001
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM43484.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_362G1_scaffold_42_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29057..29941
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22028.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator LysR family
L2_039_362G1_scaffold_42_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30177..31214
DNA (1038bp) protein (346aa)
Sulfite reductase, subunit A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTS5_9FIRM
Sulfite reductase, subunit A {ECO:0000313|EMBL:EHM43486.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
sulfite reductase
L2_039_362G1_scaffold_42_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31231..32022
DNA (792bp) protein (264aa)
Sulfite reductase, subunit B n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C1B3_9CLOT
Sulfite reductase, subunit B {ECO:0000313|EMBL:ERI77853.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_039_362G1_scaffold_42_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32041..33108
DNA (1068bp) protein (356aa)
Sulfite reductase, subunit C n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM64_9FIRM
Sulfite reductase, subunit C {ECO:0000313|EMBL:EHO22031.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
anaerobic sulfite reductase subunit C
Displaying items 1-30 of 56 in total

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