ggKbase home page

L2_039_362G1_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_76_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..186
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46782.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
4Fe-4S binding protein
L2_039_362G1_scaffold_76_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

149..868
DNA (720bp) protein (240aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD85_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EGJ46781.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
class II aldolase/adducin family protein
L2_039_362G1_scaffold_76_3
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

865..1941
DNA (1077bp) protein (359aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2L3_9FIRM
L2_039_362G1_scaffold_76_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(2008..3321)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YKH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15721.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
cyclomaltodextrinase
L2_039_362G1_scaffold_76_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3723..4316)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48313.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Fe(3+)-transporting ATPase
L2_039_362G1_scaffold_76_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(4313..5095)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15166.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
binding-protein-dependent transport system inner membrane protein
L2_039_362G1_scaffold_76_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5082..6161)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48311.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_039_362G1_scaffold_76_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6207..6866)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48310.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Crp/Fnr family transcriptional regulator
L2_039_362G1_scaffold_76_9
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7050..7706)
DNA (657bp) protein (219aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XCV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06261.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L2_039_362G1_scaffold_76_10
unknown

Not on your lists

7852..8124
DNA (273bp) protein (91aa)

This feature has no annotations

L2_039_362G1_scaffold_76_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8229..8861)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48309.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_039_362G1_scaffold_76_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8906..9460)
DNA (555bp) protein (185aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Fumarate hydratase subunit beta n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCJ7_9FIRM
Fumarate hydratase subunit beta {ECO:0000313|EMBL:EGJ48308.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_039_362G1_scaffold_76_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9499..10314)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57638.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_039_362G1_scaffold_76_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10349..11188)
DNA (840bp) protein (280aa)
fumarase alpha subunit (EC:4.2.1.2)
Fumarate hydratase subunit alpha n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCJ5_9FIRM
Fumarate hydratase subunit alpha {ECO:0000313|EMBL:EGJ48306.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_039_362G1_scaffold_76_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11312..12883)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48305.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_039_362G1_scaffold_76_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12880..13416)
DNA (537bp) protein (179aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCJ3_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGJ48304.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ECF subfamily RNA polymerase sigma-24 factor
L2_039_362G1_scaffold_76_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13963..16329
DNA (2367bp) protein (789aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Endonuclease MutS2 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H8_9FIRM
mutS2; MutS2 protein
L2_039_362G1_scaffold_76_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16734..16997
DNA (264bp) protein (88aa)
Phosphocarrier protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H7_9FIRM
Phosphocarrier protein {ECO:0000313|EMBL:EGJ48224.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
crh; HPr-like protein Crh
L2_039_362G1_scaffold_76_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17162..18004
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9M7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34726.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
VanW family protein
L2_039_362G1_scaffold_76_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18023..19852
DNA (1830bp) protein (610aa)
UvrABC system protein C n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H6_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
uvrC; UvrABC system protein C
L2_039_362G1_scaffold_76_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19900..20460
DNA (561bp) protein (187aa)
RsmD family RNA methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H5_9FIRM
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EGJ48222.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_039_362G1_scaffold_76_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20457..20954
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H4_9FIRM
L2_039_362G1_scaffold_76_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20958..21488
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48220.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_039_362G1_scaffold_76_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21737..22705
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47065.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L2_039_362G1_scaffold_76_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22702..23505
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47066.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Mn/Zn ABC transporter ATPase
L2_039_362G1_scaffold_76_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23505..24350
DNA (846bp) protein (282aa)
Zinc transport system permease n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE21_9FIRM
Zinc transport system permease {ECO:0000313|EMBL:EGJ47067.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC-type transporter, integral membrane subunit
L2_039_362G1_scaffold_76_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24389..24601)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47509.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_039_362G1_scaffold_76_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24644..25825)
DNA (1182bp) protein (394aa)
Sporulation integral membrane protein YlbJ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAY2_9FIRM
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:EGJ47510.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative membrane protein
L2_039_362G1_scaffold_76_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25973..26698)
DNA (726bp) protein (242aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T8_9FIRM
glucosamine-6-phosphate isomerase
L2_039_362G1_scaffold_76_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27295..28185
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46833.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
glycoside hydrolase family protein
Displaying items 1-30 of 46 in total

View Taxonomy