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L2_039_362G1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_183_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138..1643)
DNA (1506bp) protein (502aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XIJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18933.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_039_362G1_scaffold_183_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1725..3014)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XII9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86691.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L2_039_362G1_scaffold_183_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3649..4473
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5R0N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26507.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L2_039_362G1_scaffold_183_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4715..5656)
DNA (942bp) protein (314aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QD75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26508.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
BadF/BadG/BcrA/BcrD family ATPase
L2_039_362G1_scaffold_183_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5671..6984)
DNA (1314bp) protein (438aa)
Family 4 glycosyl hydrolase n=5 Tax=Clostridiales RepID=A5KQC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26509.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
glycoside hydrolase family protein
L2_039_362G1_scaffold_183_6
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7002..7817)
DNA (816bp) protein (272aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QCX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86695.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
binding-protein-dependent transporters inner membrane component
L2_039_362G1_scaffold_183_7
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7830..8759)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QWF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26511.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
binding-protein-dependent transporters inner membrane component
L2_039_362G1_scaffold_183_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8778..9224)
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5R0N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26512.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
family 1 extracellular solute-binding protein
L2_039_362G1_scaffold_183_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9226..9492)
DNA (267bp) protein (89aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5R0N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26512.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L2_039_362G1_scaffold_183_10
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9511..11244)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QD78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86698.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
glycoside hydrolase
L2_039_362G1_scaffold_183_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11552..12277
DNA (726bp) protein (242aa)
UbiC transcription regulator-associated domain protein n=5 Tax=Clostridiales RepID=A5KQC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26514.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
GntR family transcriptional regulator
L2_039_362G1_scaffold_183_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12442..13017)
DNA (576bp) protein (192aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QCY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18923.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Transcriptional regulator
L2_039_362G1_scaffold_183_13
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13078..13833)
DNA (756bp) protein (252aa)
Phosphotransferase enzyme family n=5 Tax=Clostridiales RepID=A5KQD0_9FIRM
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EFV18922.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Phosphotransferase enzyme family.
L2_039_362G1_scaffold_183_14
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14102..16720)
DNA (2619bp) protein (873aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Alcohol dehydrogenase n=4 Tax=Clostridiales RepID=E5XIH8_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L2_039_362G1_scaffold_183_15
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17000..17518)
DNA (519bp) protein (173aa)
50S ribosomal protein L17 n=5 Tax=Clostridiales RepID=A5KQD2_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
LSU ribosomal protein L17P
L2_039_362G1_scaffold_183_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17780..18742)
DNA (963bp) protein (321aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
DNA-directed RNA polymerase subunit alpha n=5 Tax=Clostridiales RepID=E5XIH6_9FIRM
DNA-directed RNA polymerase subunit alpha
L2_039_362G1_scaffold_183_17
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18802..19395)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=5 Tax=Clostridiales RepID=E5XIH5_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
SSU ribosomal protein S4P
L2_039_362G1_scaffold_183_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19481..19876)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=6 Tax=Clostridiales RepID=B5CSS6_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
SSU ribosomal protein S11P
L2_039_362G1_scaffold_183_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20028..20396)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=4 Tax=Lachnospiraceae RepID=A5KQD7_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
30S ribosomal protein S13
L2_039_362G1_scaffold_183_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20788..20901)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=20 Tax=Firmicutes RepID=D9QZN6_CLOSW
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_039_362G1_scaffold_183_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21188..21406)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=5 Tax=Clostridiales RepID=A5KQD9_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
translation initiation factor IF-1
L2_039_362G1_scaffold_183_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21454..22248)
DNA (795bp) protein (265aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=5 Tax=Clostridiales RepID=A5KQE0_9FIRM
L2_039_362G1_scaffold_183_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22255..23607)
DNA (1353bp) protein (451aa)
Protein translocase subunit SecY n=5 Tax=Clostridiales RepID=A5KQE1_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
protein translocase subunit secY/sec61 alpha
L2_039_362G1_scaffold_183_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23607..24047)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=3 Tax=Clostridiales RepID=A5KQE2_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
LSU ribosomal protein L15P
L2_039_362G1_scaffold_183_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24068..24250)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=5 Tax=Clostridiales RepID=A5KQE3_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
LSU ribosomal protein L30P
L2_039_362G1_scaffold_183_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24310..24819)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=5 Tax=Clostridiales RepID=A5KQE4_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
SSU ribosomal protein S5P
L2_039_362G1_scaffold_183_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24835..25203)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=5 Tax=Clostridiales RepID=A5KQE5_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
LSU ribosomal protein L18P
L2_039_362G1_scaffold_183_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25221..25763)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=5 Tax=Clostridiales RepID=A5KQE6_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
LSU ribosomal protein L6P
L2_039_362G1_scaffold_183_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25943..26344)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=5 Tax=Clostridiales RepID=A5KQE7_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Ribosomal protein S8
L2_039_362G1_scaffold_183_30
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26433..26618)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=5 Tax=Clostridiales RepID=A5KQF0_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Ribosomal protein S14
Displaying items 1-30 of 45 in total

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