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L2_039_362G1_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_193_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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686..1531
DNA (846bp) protein (282aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CBK99485.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CBK99485.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBK99485.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN6_9FIRM
L2_039_362G1_scaffold_193_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1533..2927
DNA (1395bp) protein (465aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.14 1.4.1.13)
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q4P6_9FIRM
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CDC30720.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_039_362G1_scaffold_193_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2979..3491)
DNA (513bp) protein (171aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q8V3_9FIRM
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CDC27211.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_039_362G1_scaffold_193_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3498..4151)
DNA (654bp) protein (218aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:CBK99487.1}; EC=3.2.2.21 {ECO:0000313|EMBL:CBK99487.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA-3-methyladenine glycosylase II n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN8_9FIRM
L2_039_362G1_scaffold_193_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4453..5118)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZH64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07447.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_039_362G1_scaffold_193_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5383..5940)
DNA (558bp) protein (186aa)
Transcriptional regulator, TetR family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZH62_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFQ07445.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Transcriptional regulator
L2_039_362G1_scaffold_193_7
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6422..7738)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Enterococcus avium ATCC 14025 RepID=S0LD19_ENTAV
Uncharacterized protein {ECO:0000313|EMBL:KFI52304.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
L2_039_362G1_scaffold_193_8
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7752..8489)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0002481B11
Uncharacterized protein {ECO:0000313|EMBL:KGK85860.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
hypothetical protein
L2_039_362G1_scaffold_193_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8514..11666)
DNA (3153bp) protein (1051aa)
type I site-specific deoxyribonuclease, HsdR family (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:CBL03157.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CBL03157.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6E8_9FIRM
L2_039_362G1_scaffold_193_10
Streptococcus iniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(11668..12459)
DNA (792bp) protein (264aa)
Uncharacterized protein n=3 Tax=Streptococcus iniae RepID=R4W5U8_STRIN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESR08811.1}; TaxID=1273539 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus iniae IUSA1.;"
L2_039_362G1_scaffold_193_11
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12460..13023)
DNA (564bp) protein (188aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DL84_9CLOT
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:CDA88375.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
restriction modification system DNA specificity domain-containing protein
L2_039_362G1_scaffold_193_12
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13028..14374)
DNA (1347bp) protein (449aa)
Type I restriction modification DNA specificity domain protein (Fragment) n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2PLA2_9FIRM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:ERK44926.1}; Flags: Fragment;; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
type I restriction modification DNA specificity domain-containing protein
L2_039_362G1_scaffold_193_13
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14380..15192)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B5866A
Uncharacterized protein {ECO:0000313|EMBL:CDE22018.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L2_039_362G1_scaffold_193_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15209..16249)
DNA (1041bp) protein (347aa)
Virulence protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F0_9FIRM
Virulence protein
Virulence protein {ECO:0000313|EMBL:CBL03159.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_039_362G1_scaffold_193_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16251..17813)
DNA (1563bp) protein (521aa)
type I restriction system adenine methylase (hsdM) (EC:2.1.1.72)
Type I restriction system adenine methylase (HsdM) {ECO:0000313|EMBL:CBL03160.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBL03160.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Type I restriction system adenine methylase (HsdM) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F1_9FIRM
L2_039_362G1_scaffold_193_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18073..19341)
DNA (1269bp) protein (423aa)
Plasmid recombination enzyme n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F3_9FIRM
Plasmid recombination enzyme.
Plasmid recombination enzyme {ECO:0000313|EMBL:CBL03162.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_039_362G1_scaffold_193_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19595..19828)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03163.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_039_362G1_scaffold_193_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19914..21029)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03164.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_039_362G1_scaffold_193_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21026..21349)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP19873.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_039_362G1_scaffold_193_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21352..22428)
DNA (1077bp) protein (359aa)
Site-specific recombinase XerD n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F7_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL03166.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_039_362G1_scaffold_193_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22433..22618)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03167.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_039_362G1_scaffold_193_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22952..23455
DNA (504bp) protein (168aa)
Helix-turn-helix n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6F9_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL03168.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_039_362G1_scaffold_193_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23613..25163)
DNA (1551bp) protein (517aa)
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZN9_9FIRM
L2_039_362G1_scaffold_193_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25385..25957
DNA (573bp) protein (191aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP0_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99489.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_039_362G1_scaffold_193_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25954..26358
DNA (405bp) protein (135aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP1_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK99490.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_039_362G1_scaffold_193_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26413..27783)
DNA (1371bp) protein (457aa)
Transporter n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP2_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_039_362G1_scaffold_193_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27941..28558)
DNA (618bp) protein (206aa)
Small primase-like proteins (Toprim domain) (EC:3.1.26.8)
Small primase-like proteins (Toprim domain) {ECO:0000313|EMBL:CBK99492.1}; EC=3.1.26.8 {ECO:0000313|EMBL:CBK99492.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Small primase-like proteins (Toprim domain) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP3_9FIRM
L2_039_362G1_scaffold_193_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28555..29583)
DNA (1029bp) protein (343aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEU97596.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEU97596.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA polymerase III, delta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3B6_9FIRM
DNA polymerase III, delta subunit
L2_039_362G1_scaffold_193_29
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29648..31681)
DNA (2034bp) protein (678aa)
ComEC/Rec2-like protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q8G9_9FIRM
ComEC/Rec2-like protein {ECO:0000313|EMBL:CDC29319.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ComEC/Rec2-related protein
L2_039_362G1_scaffold_193_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31760..32299)
DNA (540bp) protein (180aa)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins (EC:2.4.2.7)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins {ECO:0000313|EMBL:CBK99493.1}; EC=2.4.2.7 {ECO:0000313|EMBL:CBK99493.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZP4_9FIRM
Displaying items 1-30 of 31 in total

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