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L2_039_362G1_scaffold_196

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_196_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(130..672)
DNA (543bp) protein (181aa)
Flavin reductase n=4 Tax=Lachnospiraceae RepID=A5KNS2_9FIRM
Iron-sulfur flavoprotein {ECO:0000313|EMBL:EFV18291.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Multimeric flavodoxin WrbA
L2_039_362G1_scaffold_196_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(794..2419)
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=4 Tax=Lachnospiraceae RepID=A5KNS1_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
chaperonin GroL
L2_039_362G1_scaffold_196_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2471..2758)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=5 Tax=Clostridiales RepID=A5KNS0_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Co-chaperonin GroES (HSP10)
L2_039_362G1_scaffold_196_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2995..3321)
DNA (327bp) protein (109aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KNR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25935.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_039_362G1_scaffold_196_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3370..4149)
DNA (780bp) protein (260aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=6 Tax=root RepID=A5KNR7_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Pleiotropic transcriptional repressor
L2_039_362G1_scaffold_196_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4331..6400)
DNA (2070bp) protein (690aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=5 Tax=Clostridiales RepID=A5KNR6_9FIRM
L2_039_362G1_scaffold_196_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6499..7572)
DNA (1074bp) protein (358aa)
DNA protecting protein DprA n=5 Tax=Clostridiales RepID=A5KNR5_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:EDK24003.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
DNA protecting protein DprA
L2_039_362G1_scaffold_196_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7668..9197)
DNA (1530bp) protein (510aa)
Mg chelatase-like protein n=5 Tax=Clostridiales RepID=A5KNR4_9FIRM
Mg chelatase {ECO:0000313|EMBL:EFV18284.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Mg chelatase-related protein
L2_039_362G1_scaffold_196_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9537..10157
DNA (621bp) protein (207aa)
RNA polymerase sigma factor n=4 Tax=Clostridiales RepID=E5XK91_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
RNA polymerase sigma-27/28 subunit,RpsK/SigK
L2_039_362G1_scaffold_196_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10338..10649)
DNA (312bp) protein (104aa)
Plasmid stabilization system protein, RelE/ParE family n=5 Tax=Clostridiales RepID=A5KNR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25929.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
plasmid stabilization system
L2_039_362G1_scaffold_196_11
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10633..10899)
DNA (267bp) protein (89aa)
Prevent-host-death family protein n=5 Tax=Clostridiales RepID=A5KNR0_9FIRM
PHD family Toxin-antitoxin system {ECO:0000313|EMBL:EFV18281.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
prevent-host-death family protein
L2_039_362G1_scaffold_196_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11175..12779)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=5 Tax=Clostridiales RepID=A5KNQ9_9FIRM
L2_039_362G1_scaffold_196_13
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13128..14681)
DNA (1554bp) protein (518aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=5 Tax=Clostridiales RepID=E5XK87_9FIRM
Threonine synthase {ECO:0000313|EMBL:EFV18279.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_039_362G1_scaffold_196_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14674..15966)
DNA (1293bp) protein (431aa)
Na+/H+ antiporter family protein n=5 Tax=Clostridiales RepID=A5KNQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25924.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Na+/H+ antiporter
L2_039_362G1_scaffold_196_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16078..16569)
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=5 Tax=Clostridiales RepID=A5KNQ4_9FIRM
L2_039_362G1_scaffold_196_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16566..17900)
DNA (1335bp) protein (445aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
3-isopropylmalate dehydratase large subunit n=5 Tax=Clostridiales RepID=A5KNQ3_9FIRM
3-isopropylmalate dehydratase large subunit
L2_039_362G1_scaffold_196_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17951..19036)
DNA (1086bp) protein (362aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=5 Tax=Clostridiales RepID=A5KNQ2_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CCZ25921.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L2_039_362G1_scaffold_196_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19169..20557)
DNA (1389bp) protein (463aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=5 Tax=Clostridiales RepID=A5KNQ1_9FIRM
L2_039_362G1_scaffold_196_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20629..21273)
DNA (645bp) protein (215aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KNQ0_9FIRM
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:EFV18273.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_039_362G1_scaffold_196_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21471..22247
DNA (777bp) protein (259aa)
Nitrate ABC transporter n=4 Tax=Clostridiales RepID=E5XK80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25918.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_039_362G1_scaffold_196_21
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22240..23037
DNA (798bp) protein (266aa)
ABC transporter, permease protein n=5 Tax=Clostridiales RepID=A5KNP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81032.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_039_362G1_scaffold_196_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23117..26509)
DNA (3393bp) protein (1131aa)
hsdR; type I restriction enzyme EcoKI R protein HsdR (EC:3.1.21.3)
Type III restriction enzyme, res subunit n=4 Tax=Clostridiales RepID=A5KNP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18270.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_039_362G1_scaffold_196_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26537..27577)
DNA (1041bp) protein (347aa)
Restriction endonuclease S subunits (EC:3.1.21.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JHV8_9FIRM
Restriction endonuclease S subunit {ECO:0000313|EMBL:EFV18263.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_039_362G1_scaffold_196_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27624..28592)
DNA (969bp) protein (323aa)
Phage integrase SAM-like domain protein n=4 Tax=Clostridiales RepID=A5KNP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25550.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Site-specific recombinase XerD
L2_039_362G1_scaffold_196_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28670..29137)
DNA (468bp) protein (156aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KNP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25549.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_039_362G1_scaffold_196_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29137..29598)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KNP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23981.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L2_039_362G1_scaffold_196_27
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29728..30132)
DNA (405bp) protein (135aa)
Nucleotidyltransferase substrate-binding family protein n=3 Tax=Clostridiales RepID=A5KNP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25547.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative nucleotidyltransferase substrate binding protein
L2_039_362G1_scaffold_196_28
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30119..30430)
DNA (312bp) protein (104aa)
Nucleotidyltransferase domain protein n=5 Tax=Clostridiales RepID=A5KNP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18264.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Nucleotidyltransferase domain.
L2_039_362G1_scaffold_196_29
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30427..31557)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JHW3_9FIRM
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EFV18269.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
restriction endonuclease S subunit
L2_039_362G1_scaffold_196_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31836..32594)
DNA (759bp) protein (253aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
N-6 DNA methylase n=3 Tax=unclassified Lachnospiraceae RepID=E5XK70_9FIRM
N-6 DNA methylase {ECO:0000313|EMBL:EFV18262.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Displaying 30 items

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