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L2_039_362G1_scaffold_277

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_277_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..213
DNA (213bp) protein (71aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=5 Tax=Clostridiales RepID=E5XDX9_9FIRM
L2_039_362G1_scaffold_277_2
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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200..1606
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=4 Tax=Clostridiales RepID=A5KKA5_9FIRM
L2_039_362G1_scaffold_277_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1591..2058
DNA (468bp) protein (156aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Mini-ribonuclease 3 n=5 Tax=Clostridiales RepID=A5KKA6_9FIRM
hypothetical protein
L2_039_362G1_scaffold_277_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2039..2815
DNA (777bp) protein (259aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridiales RepID=A5KKA7_9FIRM
RNA methyltransferase {ECO:0000313|EMBL:EFV20487.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_039_362G1_scaffold_277_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2850..3476
DNA (627bp) protein (209aa)
RNA polymerase sigma factor n=5 Tax=Clostridiales RepID=A5KKA8_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
RNA polymerase, sigma 30 subunit, SigH
L2_039_362G1_scaffold_277_6
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3509..3955
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=5 Tax=Clostridiales RepID=A5KKA9_9FIRM
L2_039_362G1_scaffold_277_7
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4439..4795
DNA (357bp) protein (119aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27354.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_039_362G1_scaffold_277_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4900..6366)
DNA (1467bp) protein (489aa)
Transporter n=4 Tax=Lachnospiraceae RepID=A5KKB1_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L2_039_362G1_scaffold_277_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6584..8251
DNA (1668bp) protein (556aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=3 Tax=unclassified Lachnospiraceae RepID=E5XDY7_9FIRM
L2_039_362G1_scaffold_277_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8275..9690
DNA (1416bp) protein (472aa)
Transcriptional regulator, GntR family n=4 Tax=Lachnospiraceae RepID=A5KKB3_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDK25766.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L2_039_362G1_scaffold_277_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9801..10043)
DNA (243bp) protein (81aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27358.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L2_039_362G1_scaffold_277_12
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10320..11600
DNA (1281bp) protein (427aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=4 Tax=Lachnospiraceae RepID=A5KKB5_9FIRM
L2_039_362G1_scaffold_277_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11809..11967
DNA (159bp) protein (53aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27360.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L2_039_362G1_scaffold_277_14
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11972..12187)
DNA (216bp) protein (72aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KKB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20497.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_039_362G1_scaffold_277_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12374..12889
DNA (516bp) protein (172aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27362.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted metal-binding protein related to the C-terminal domain of SecA
L2_039_362G1_scaffold_277_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12890..13618
DNA (729bp) protein (243aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KKB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79440.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L2_039_362G1_scaffold_277_17
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13669..13989
DNA (321bp) protein (107aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20500.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Domain of Unknown Function (DUF1540).
L2_039_362G1_scaffold_277_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14313..15686
DNA (1374bp) protein (458aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KKC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25347.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted permease
L2_039_362G1_scaffold_277_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15691..16611
DNA (921bp) protein (307aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=5 Tax=Clostridiales RepID=A5KKC3_9FIRM
L2_039_362G1_scaffold_277_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17039..18292)
DNA (1254bp) protein (418aa)
Transposase, IS4 family n=8 Tax=root RepID=A5KKC4_9FIRM
Transposase IS4 family {ECO:0000313|EMBL:CCZ25349.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_039_362G1_scaffold_277_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19129..20328
DNA (1200bp) protein (400aa)
Classes I and II family Aminotransferase n=4 Tax=Lachnospiraceae RepID=E5XDZ9_9FIRM
Classes I and II family Aminotransferase {ECO:0000313|EMBL:EFV20504.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Aspartate/tyrosine/aromatic aminotransferase
L2_039_362G1_scaffold_277_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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20325..20861
DNA (537bp) protein (179aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=4 Tax=Lachnospiraceae RepID=A5KKC9_9FIRM
DUTPase {ECO:0000313|EMBL:EFV20505.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_039_362G1_scaffold_277_23
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21045..21719
DNA (675bp) protein (225aa)
Putative penicillin-binding protein 1F n=4 Tax=Lachnospiraceae RepID=A5KKD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79653.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L2_039_362G1_scaffold_277_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21721..23217
DNA (1497bp) protein (499aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QDK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26648.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Bacillus/Clostridium GerA spore germination protein.
L2_039_362G1_scaffold_277_25
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23386..24249
DNA (864bp) protein (288aa)
EDD domain protein, DegV family n=5 Tax=Clostridiales RepID=A5KKD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79651.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
EDD domain protein, DegV family
L2_039_362G1_scaffold_277_26
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24390..26339)
DNA (1950bp) protein (650aa)
ABC transporter, ATP-binding protein n=4 Tax=Lachnospiraceae RepID=A5KKD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79650.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ATPase components of ABC transporters with duplicated ATPase domains
Displaying 26 items

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