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L2_039_362G1_scaffold_317

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_317_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1267
DNA (1266bp) protein (422aa)
Serine--tRNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR52_9FIRM
Serine-tRNA ligase {ECO:0000313|EMBL:EHO27309.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
serS; seryl-tRNA synthetase
L2_039_362G1_scaffold_317_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1284..1502
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27310.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_362G1_scaffold_317_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1557..1973
DNA (417bp) protein (139aa)
Large-conductance mechanosensitive channel n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJF7_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
mscL; large-conductance mechanosensitive channel
L2_039_362G1_scaffold_317_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1966..2316
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50282.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_362G1_scaffold_317_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2319..3029
DNA (711bp) protein (237aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
gidB; methyltransferase GidB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BXP8_9CLOT
L2_039_362G1_scaffold_317_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3121..3861
DNA (741bp) protein (247aa)
Site-determining protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR57_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
minD; septum site-determining protein MinD
L2_039_362G1_scaffold_317_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3894..4310
DNA (417bp) protein (139aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Clostridiales RepID=G9YR58_9FIRM
Methylglyoxal synthase {ECO:0000313|EMBL:KGF57520.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_362G1_scaffold_317_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5123..6475
DNA (1353bp) protein (451aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Clostridiales RepID=G9YR60_9FIRM
L2_039_362G1_scaffold_317_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6540..7460
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57522.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_362G1_scaffold_317_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7677..9479
DNA (1803bp) protein (601aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate-tRNA ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJG5_9FIRM
Aspartate-tRNA ligase {ECO:0000313|EMBL:EHO27319.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_362G1_scaffold_317_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10356..12164)
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Elongation factor 4 n=2 Tax=Clostridiales RepID=G9YQ69_9FIRM
lepA; GTP-binding protein LepA
L2_039_362G1_scaffold_317_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12558..13253)
DNA (696bp) protein (232aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=U2BFZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27321.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative Xre family DNA-binding protein
L2_039_362G1_scaffold_317_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13448..14431
DNA (984bp) protein (328aa)
Phosphate acetyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ65_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:EHM51938.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Pta; phosphotransacetylase
L2_039_362G1_scaffold_317_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15077..16570
DNA (1494bp) protein (498aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CJG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27323.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative metalloendopeptidase
L2_039_362G1_scaffold_317_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16613..17803)
DNA (1191bp) protein (397aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=2 Tax=Clostridiales RepID=U2BWC4_9CLOT
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EHO27324.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_362G1_scaffold_317_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17847..17996)
DNA (150bp) protein (50aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=2 Tax=Clostridiales RepID=U2BWC4_9CLOT
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:ERI76550.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_039_362G1_scaffold_317_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18070..18759
DNA (690bp) protein (230aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YSN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27325.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_362G1_scaffold_317_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18763..19524
DNA (762bp) protein (254aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative Baf family transcriptional acitvator (EC:2.7.1.33)
Type III pantothenate kinase n=2 Tax=Clostridiales RepID=G9YSM9_9FIRM
L2_039_362G1_scaffold_317_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19562..20419)
DNA (858bp) protein (286aa)
YihY family protein n=3 Tax=Clostridiales RepID=G9YSM8_9FIRM
YihY family protein {ECO:0000313|EMBL:EHO27327.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
yfkH; putative integral inner membrane protein with ribonuclease fold
L2_039_362G1_scaffold_317_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20527..20790)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJH4_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsT; 30S ribosomal protein S20
L2_039_362G1_scaffold_317_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20989..21894
DNA (906bp) protein (302aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
gpr; putative germination protease (EC:3.4.24.78)
Germination protease n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSM6_9FIRM
L2_039_362G1_scaffold_317_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21891..22169)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C2G4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI61596.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_039_362G1_scaffold_317_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22291..22779
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AN99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI61595.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_039_362G1_scaffold_317_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23091..24524
DNA (1434bp) protein (478aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJH9_9FIRM
Displaying 24 items

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