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L2_039_362G1_scaffold_350

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_350_1
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33..629)
DNA (597bp) protein (199aa)
Resolvase N-terminal domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NBC2_9CLOT
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDC03496.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Resolvase domain protein
L2_039_362G1_scaffold_350_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(982..2355)
DNA (1374bp) protein (458aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium leptum CAG:27 RepID=R6P0N5_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDC03497.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L2_039_362G1_scaffold_350_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2358..2696)
DNA (339bp) protein (113aa)
Branched-chain amino acid transport protein (AzlD) n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVD8_9CLOT
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:EDO60938.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Branched-chain amino acid transport protein (AzlD).
L2_039_362G1_scaffold_350_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2696..3436)
DNA (741bp) protein (247aa)
AzlC protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVD7_9CLOT
AzlC protein {ECO:0000313|EMBL:EDO60937.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
AzlC family protein
L2_039_362G1_scaffold_350_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3480..4628)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03500.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_039_362G1_scaffold_350_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4891..5067)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VVD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03501.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Domain of Unknown Function (DUF1540).
L2_039_362G1_scaffold_350_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5305..6825)
DNA (1521bp) protein (507aa)
Trypsin n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVD4_9CLOT
Trypsin {ECO:0000313|EMBL:EDO60934.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_039_362G1_scaffold_350_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7576..8682)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MUU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03503.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_039_362G1_scaffold_350_9
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8980..10932
DNA (1953bp) protein (651aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
metG; Methionine-tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVD0_9CLOT
L2_039_362G1_scaffold_350_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10929..11696
DNA (768bp) protein (256aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXH3_9CLOT
Hydrolase TatD family {ECO:0000313|EMBL:CDC03505.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_362G1_scaffold_350_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11693..12595
DNA (903bp) protein (301aa)
Radical SAM domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVC8_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EDO60928.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
radical SAM protein
L2_039_362G1_scaffold_350_12
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12995..13312
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=2 Tax=Clostridium RepID=A7VVC7_9CLOT
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDO60927.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative transcriptional regulator
L2_039_362G1_scaffold_350_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13309..13848
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VVC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03508.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_039_362G1_scaffold_350_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14682..17045)
DNA (2364bp) protein (788aa)
Putative stage II sporulation protein E n=1 Tax=Clostridium leptum CAG:27 RepID=R6N5D9_9CLOT
Putative stage II sporulation protein E {ECO:0000313|EMBL:CDC03509.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Stage II sporulation protein E (SpoIIE).
L2_039_362G1_scaffold_350_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17313..18275)
DNA (963bp) protein (321aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXH8_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDC03510.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
beta-lactamase
L2_039_362G1_scaffold_350_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18360..19538)
DNA (1179bp) protein (393aa)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVB9_9CLOT
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:EDO60918.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Polynucleotide adenylyltransferase region
L2_039_362G1_scaffold_350_17
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20073..20768)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MUU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03513.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
scm; collagen-binding MSCRAMM Scm
L2_039_362G1_scaffold_350_18
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20861..21151)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N5E2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03514.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_362G1_scaffold_350_19
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21366..22574)
DNA (1209bp) protein (403aa)
Stage II sporulation protein P n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVB1_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:EDO60911.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
stage II sporulation protein P
L2_039_362G1_scaffold_350_20
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22686..22772)
DNA (87bp) protein (29aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Germination protease n=2 Tax=Clostridium RepID=A7VVA9_9CLOT
Displaying 20 items

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