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L2_039_362G1_scaffold_681

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_681_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..191)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9HW26_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64624.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
phage antirepressor
L2_039_362G1_scaffold_681_2
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(245..748)
DNA (504bp) protein (168aa)
DUTP diphosphatase {ECO:0000313|EMBL:EFF62575.1}; EC=3.6.1.23 {ECO:0000313|EMBL:EFF62575.1};; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
DUTP diphosphatase n=2 Tax=Turicibacter RepID=D4W901_9FIRM
dUTP pyrophosphatase
L2_039_362G1_scaffold_681_3
unknown

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869..1090
DNA (222bp) protein (74aa)

This feature has no annotations

L2_039_362G1_scaffold_681_4
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1178..2578)
DNA (1401bp) protein (467aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EEX21876.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EEX21876.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
nrdA; ribonucleotide reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_BLAHA
L2_039_362G1_scaffold_681_5

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comp(2634..3350)
DNA (717bp) protein (239aa)
id=2722906 bin=GWC1_OD1_38_17 species=Trebouxiophyceae sp. MX-AZ01 genus=unknown taxon_order=unknown taxon_class=Trebouxiophyceae phylum=Chlorophyta tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Uncharacterized protein {ECO:0000313|EMBL:KKQ59176.1}; Flags: Fragment;; TaxID=1618936 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_38_16.;"
L2_039_362G1_scaffold_681_6
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3474..4301)
DNA (828bp) protein (276aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EEX21876.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EEX21876.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L7Y1_BLAHA
L2_039_362G1_scaffold_681_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4301..4846)
DNA (546bp) protein (182aa)
Putative guanylate kinase n=1 Tax=Clostridium botulinum BKT015925 RepID=F4AAT7_CLOBO
putative guanylate kinase
Putative guanylate kinase {ECO:0000313|EMBL:AEB77254.1}; TaxID=929506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum BKT015925.;"
L2_039_362G1_scaffold_681_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4843..5292)
DNA (450bp) protein (150aa)
DNA N-6-adenine-methyltransferase (Dam) n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEW6_9FIRM
DNA N-6-adenine-methyltransferase (Dam) {ECO:0000313|EMBL:EDS09899.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
phage N-6-adenine-methyltransferase
L2_039_362G1_scaffold_681_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5295..6095)
DNA (801bp) protein (267aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
DNA (Cytosine-5-)-methyltransferase n=2 Tax=Clostridium botulinum RepID=C3KUD5_CLOB6
DNA methylase
L2_039_362G1_scaffold_681_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6096..6809)
DNA (714bp) protein (238aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Thymidylate synthase ThyX n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY96_9FIRM
thyX; FAD-dependent thymidylate synthase
L2_039_362G1_scaffold_681_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6800..8998)
DNA (2199bp) protein (733aa)
Chromatin associated protein KTI12./Calcineurin-like phosphoesterase./RNA ligase. (EC:3.1.4.37)
Chromatin associated protein KTI12./Calcineurin-like phosphoesterase./RNA ligase {ECO:0000313|EMBL:CBL02489.1}; EC=3.1.4.37 {ECO:0000313|EMBL:CBL02489.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Chromatin associated protein KTI12./Calcineurin-like phosphoesterase./RNA ligase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCC6_9FIRM
L2_039_362G1_scaffold_681_12
unknown

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comp(8976..9182)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_039_362G1_scaffold_681_13
unknown

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comp(9228..9527)
DNA (300bp) protein (100aa)

This feature has no annotations

L2_039_362G1_scaffold_681_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9615..10898)
DNA (1284bp) protein (428aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
ATP-dependent DNA ligase {ECO:0000313|EMBL:CBL02503.1}; EC=6.5.1.1 {ECO:0000313|EMBL:CBL02503.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
ATP-dependent DNA ligase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCE0_9FIRM
L2_039_362G1_scaffold_681_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10901..12322)
DNA (1422bp) protein (474aa)
Poly A polymerase head domain protein n=1 Tax=Clostridium difficile Y307 RepID=T4FLI0_CLODI
Putative tRNA-nucleotidyltransferase/Poly(A) polymerase family member {ECO:0000313|EMBL:CDS88077.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
tRNA-nucleotidyltransferase/Poly(A) polymerase family protein
L2_039_362G1_scaffold_681_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12312..13313)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BUW2_9VIRU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68015.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_039_362G1_scaffold_681_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13336..14121)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LW64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62566.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
putative phage reductase
L2_039_362G1_scaffold_681_18
unknown

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comp(14121..14423)
DNA (303bp) protein (101aa)

This feature has no annotations

L2_039_362G1_scaffold_681_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14423..14677)
DNA (255bp) protein (85aa)
UPI0002F0D958 related cluster n=1 Tax=unknown RepID=UPI0002F0D958
Uncharacterized protein {ECO:0000313|EMBL:CCY98951.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
phage protein
L2_039_362G1_scaffold_681_20
unknown

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comp(14688..14888)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 20 items

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