name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L2_039_362G1_scaffold_66_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
142..954
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90465.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Domain of unknown function (DUF1848).
|
|
L2_039_362G1_scaffold_66_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(1064..2362)
|
Phage integrase family protein n=1 Tax=Clostridium difficile P28 RepID=T4P627_CLODI
Phage integrase family protein {ECO:0000313|EMBL:EQJ63225.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
|
|
L2_039_362G1_scaffold_66_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2486..3136)
|
Helix-turn-helix family protein n=1 Tax=Clostridium difficile P28 RepID=T4P6A1_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ63224.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
|
|
L2_039_362G1_scaffold_66_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
3318..3533
|
Excisionase family DNA binding domain-containing protein n=2 Tax=Clostridiales RepID=E5VQC0_9FIRM
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:EQJ63223.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
|
|
L2_039_362G1_scaffold_66_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
3814..5220
|
MobA/MobL family protein n=1 Tax=Clostridium difficile P28 RepID=T4P6J2_CLODI
MobA/MobL family protein {ECO:0000313|EMBL:EQJ63222.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
|
|
L2_039_362G1_scaffold_66_6
unknown
|
Not on your lists |
comp(5346..5486)
|
ABC transporter n=1 Tax=Bacillus acidiproducens RepID=UPI00035F4DC1
hypothetical protein
|
|
L2_039_362G1_scaffold_66_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(5600..6826)
|
H+ Antiporter protein n=3 Tax=Bacteria RepID=E5VQB8_9FIRM
Macrolide efflux A domain protein {ECO:0000313|EMBL:EQJ63221.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC transporter permease
|
|
L2_039_362G1_scaffold_66_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(7192..7413)
|
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4P623_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ63220.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
|
|
L2_039_362G1_scaffold_66_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(7358..7735)
|
Transposon-encoded TnpV family protein n=1 Tax=Clostridium difficile P28 RepID=T4P697_CLODI
Transposon-encoded TnpV family protein {ECO:0000313|EMBL:EQJ63219.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
|
|
L2_039_362G1_scaffold_66_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(8065..8634)
|
Putative bacteriocin transport accessory protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V1_9FIRM
Putative bacteriocin transport accessory protein {ECO:0000313|EMBL:EEC90464.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
|
|
L2_039_362G1_scaffold_66_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
8903..9562
|
DNA repair protein RadC n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EEC90463.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
radC; RadC protein
|
|
L2_039_362G1_scaffold_66_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
9610..10446
|
Cell shape-determining protein MreC n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U9_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
rod shape-determining protein MreC
|
|
L2_039_362G1_scaffold_66_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
10443..11009
|
Putative rod shape-determining protein MreD n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U8_9FIRM
Putative rod shape-determining protein MreD {ECO:0000313|EMBL:EEC90461.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
|
|
L2_039_362G1_scaffold_66_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
11069..13645
|
DNA-directed DNA polymerase {ECO:0000313|EMBL:EEC90460.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEC90460.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA polymerase I (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U7_9FIRM
|
|
L2_039_362G1_scaffold_66_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
13645..14466
|
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
formamidopyrimidine-DNA glycosylase (fpg) (EC:3.2.2.23 4.2.99.18)
DNA-formamidopyrimidine glycosylase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U6_9FIRM
|
|
L2_039_362G1_scaffold_66_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
14439..15044
|
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Dephospho-CoA kinase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U5_9FIRM
Dephospho-CoA kinase
|
|
L2_039_362G1_scaffold_66_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
15034..16167
|
Replication initiation and membrane attachment protein, DnaB/DnaD family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U4_9FIRM
Replication initiation and membrane attachment protein, DnaB/DnaD family {ECO:0000313|EMBL:EEC90457.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DnaD and phage-associated domain
|
|
L2_039_362G1_scaffold_66_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
16167..17069
|
Putative primosomal protein DnaI n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U3_9FIRM
Putative primosomal protein DnaI {ECO:0000313|EMBL:EEC90456.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA replication protein
|
|
L2_039_362G1_scaffold_66_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
17148..18017
|
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EEC90455.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EEC90455.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Z4_9FIRM
|
|
L2_039_362G1_scaffold_66_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
18080..19933
|
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEC90454.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEC90454.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Z3_9FIRM
dipeptidyl aminopeptidase/acylaminoacyl-peptidase
|
|
L2_039_362G1_scaffold_66_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
20024..21292
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Z2_9FIRM
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
|
|
L2_039_362G1_scaffold_66_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
21344..22705
|
MATE efflux family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Z1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEC90452.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
putative efflux protein, MATE family
|
|
L2_039_362G1_scaffold_66_23
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(22736..22960)
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90451.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
|
|
L2_039_362G1_scaffold_66_24
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
23087..23308
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90450.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
|
|
L2_039_362G1_scaffold_66_25
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
23405..23827
|
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y8_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEC90449.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
diguanylate cyclase (GGDEF) domain
|
|
L2_039_362G1_scaffold_66_26
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
23875..24345
|
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y8_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEC90449.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
diguanylate cyclase (GGDEF) domain
|
|
L2_039_362G1_scaffold_66_27
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
24296..25084
|
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y8_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEC90449.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
diguanylate cyclase (GGDEF) domain
|
|
L2_039_362G1_scaffold_66_28
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
25163..26425
|
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y8_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEC90449.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
diguanylate cyclase (GGDEF) domain
|
|
L2_039_362G1_scaffold_66_29
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
26550..27509
|
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y7_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEC90448.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted transcriptional regulators
|
|
L2_039_362G1_scaffold_66_30
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(27540..28775)
|
Transporter, major facilitator family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9Y6_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEC90447.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
|