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L2_039_362G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_142_1
unknown

Not on your lists

comp(34..159)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_039_362G1_scaffold_142_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(128..550)
DNA (423bp) protein (141aa)
Transposase-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBQ2_9FIRM
Transposase and inactivated derivatives {ECO:0000313|EMBL:CRH80387.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
transposase IS200-family protein
L2_039_362G1_scaffold_142_3
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(540..728)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z358_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH80386.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L2_039_362G1_scaffold_142_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(836..1336)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF6_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH79873.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L2_039_362G1_scaffold_142_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1380..3209)
DNA (1830bp) protein (610aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Histidine kinase A domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF5_9FIRM
signal transduction histidine kinase
L2_039_362G1_scaffold_142_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3202..3903)
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEC89579.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Two component transcriptional regulator, winged helix family
L2_039_362G1_scaffold_142_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3922..4572)
DNA (651bp) protein (217aa)
N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF3_9FIRM
N-acetylglucosaminylphosphatidylinositol deacetylase {ECO:0000313|EMBL:EEC89578.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_142_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4709..7027
DNA (2319bp) protein (773aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89577.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_142_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6979..7380
DNA (402bp) protein (134aa)
GtrA-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF1_9FIRM
GtrA-like protein {ECO:0000313|EMBL:EEC89576.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
teichoic acid glycosylation protein
L2_039_362G1_scaffold_142_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7367..8287
DNA (921bp) protein (307aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEC89575.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEC89575.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF0_9FIRM
glycosyl transferase family protein
L2_039_362G1_scaffold_142_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8284..9525)
DNA (1242bp) protein (414aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCE9_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:EEC89574.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_142_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9536..10027)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89573.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_142_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10676..11086)
DNA (411bp) protein (137aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCE3_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_142_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11089..12474)
DNA (1386bp) protein (462aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ATP synthase subunit beta n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCE2_9FIRM
F-type H+-transporting ATPase subunit beta
L2_039_362G1_scaffold_142_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12465..13385)
DNA (921bp) protein (307aa)
ATP synthase gamma chain n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCE1_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ATP synthase F1 subunit gamma
L2_039_362G1_scaffold_142_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13385..15127)
DNA (1743bp) protein (581aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
atpA2; ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCE0_9FIRM
L2_039_362G1_scaffold_142_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15128..15592)
DNA (465bp) protein (155aa)
ATP synthase subunit b n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD9_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ATP synthase F0 subunit B
L2_039_362G1_scaffold_142_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15605..15826)
DNA (222bp) protein (74aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0, C subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD8_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_142_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15844..16629)
DNA (786bp) protein (262aa)
ATP synthase subunit a n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD7_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
F0F1 ATP synthase subunit A
L2_039_362G1_scaffold_142_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16799..17152)
DNA (354bp) protein (118aa)
Transcriptional regulator, ArsR family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD6_9FIRM
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEC89561.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_142_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17260..17511
DNA (252bp) protein (84aa)
Heavy metal-associated domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD5_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:EEC89560.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Heavy-metal-associated domain.
L2_039_362G1_scaffold_142_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17602..19470
DNA (1869bp) protein (623aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EEC89559.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EEC89559.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD4_9FIRM
L2_039_362G1_scaffold_142_23
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19558..20427
DNA (870bp) protein (290aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD3_9FIRM
L2_039_362G1_scaffold_142_24
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20617..21249
DNA (633bp) protein (211aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD1_9FIRM
L2_039_362G1_scaffold_142_25
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21242..22156
DNA (915bp) protein (305aa)
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EEC89555.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEC89555.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
holB; DNA polymerase III, delta' subunit (EC:2.7.7.7)
DNA polymerase III, delta' subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCD0_9FIRM
L2_039_362G1_scaffold_142_26
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22156..22989
DNA (834bp) protein (278aa)
PSP1 C-terminal domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCC9_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EEC89554.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_142_27
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22982..23827
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I (Fragment) n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCC8_9FIRM
S-adenosylmethionine-dependent methyltransferase, YraL family {ECO:0000313|EMBL:EEC89553.1}; Flags: Fragment;; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
tetrapyrrole methylase family protein
L2_039_362G1_scaffold_142_28
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23943..25625
DNA (1683bp) protein (561aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCC7_9FIRM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEC89604.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
family 5 extracellular solute-binding protein
L2_039_362G1_scaffold_142_29
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

26068..27726
DNA (1659bp) protein (553aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCB1_9FIRM
Oligopeptide transport system binding protein {ECO:0000313|EMBL:CRH76098.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
OppA10; ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components
L2_039_362G1_scaffold_142_30
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28053..28541
DNA (489bp) protein (163aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCB0_9FIRM
Displaying items 1-30 of 36 in total

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