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L2_039_362G1_scaffold_446

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_446_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(140..1348)
DNA (1209bp) protein (403aa)
L-serine ammonia-lyase (EC:4.3.1.17)
Putative L-serine ammonia-lyase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V6_9FIRM
Putative L-serine ammonia-lyase {ECO:0000313|EMBL:EEC90417.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_446_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1497..3272
DNA (1776bp) protein (592aa)
Acyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V5_9FIRM
Acyltransferase {ECO:0000313|EMBL:EEC90416.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
acyltransferase 3
L2_039_362G1_scaffold_446_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3289..3996)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90415.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_446_4
Firmicutes bacterium M10-2, Firmicutes, Bacteria

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4249..8346
DNA (4098bp) protein (1366aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B6B29A
rpoB; DNA-directed RNA polymerase subunit beta
L2_039_362G1_scaffold_446_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8355..12239
DNA (3885bp) protein (1295aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U1_9FIRM
L2_039_362G1_scaffold_446_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12288..12575
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90473.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_446_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12586..13593)
DNA (1008bp) protein (336aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
aspartate-ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9T9_9FIRM
L2_039_362G1_scaffold_446_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13672..14457
DNA (786bp) protein (262aa)
Glycosyltransferase, family 8 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9T8_9FIRM
Glycosyltransferase, family 8 {ECO:0000313|EMBL:EEC90471.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_446_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14454..15812
DNA (1359bp) protein (453aa)
Transporter n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9T7_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Na+-dependent transporters of the SNF family
L2_039_362G1_scaffold_446_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15824..16765
DNA (942bp) protein (314aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L-lactate dehydrogenase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9T6_9FIRM
L-lactate dehydrogenase
L2_039_362G1_scaffold_446_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16824..18137
DNA (1314bp) protein (438aa)
MATE efflux family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9T5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEC90468.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
MATE efflux family protein
L2_039_362G1_scaffold_446_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18189..18398
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90467.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_446_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18500..19393
DNA (894bp) protein (298aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9T3_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EEC90466.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Lysophospholipase
Displaying 13 items

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