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L2_039_362G1_scaffold_489

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_489_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(204..416)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C852_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91026.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_489_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(437..1330)
DNA (894bp) protein (298aa)
Putative membrane protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C853_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEC91027.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L2_039_362G1_scaffold_489_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1327..3810)
DNA (2484bp) protein (828aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00937}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00937};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00937}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA topoisomerase 4 subunit A n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C854_9FIRM
parC; DNA topoisomerase IV subunit A
L2_039_362G1_scaffold_489_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3807..5732)
DNA (1926bp) protein (642aa)
DNA topoisomerase IV, B subunit {ECO:0000313|EMBL:EEC91029.1}; EC=5.99.1.- {ECO:0000313|EMBL:EEC91029.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
parE; DNA topoisomerase IV subunit B (EC:5.99.1.-)
DNA topoisomerase IV, B subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C855_9FIRM
L2_039_362G1_scaffold_489_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6059..6673
DNA (615bp) protein (205aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C857_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L2_039_362G1_scaffold_489_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6664..7152
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C858_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91032.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ComK protein.
L2_039_362G1_scaffold_489_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7161..7589)
DNA (429bp) protein (143aa)
Endoribonuclease L-PSP n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C859_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EEC91033.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Putative translation initiation inhibitor, yjgF family
L2_039_362G1_scaffold_489_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7615..9957)
DNA (2343bp) protein (781aa)
FtsK/SpoIIIE family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C860_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EEC91034.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA translocase FtsK
L2_039_362G1_scaffold_489_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9972..11663)
DNA (1692bp) protein (564aa)
Predicted hydrolase of the metallo-beta-lactamase superfamily (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C861_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91035.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_489_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11703..13136)
DNA (1434bp) protein (478aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C862_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_039_362G1_scaffold_489_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13198..13371)
DNA (174bp) protein (58aa)
4Fe-4S binding domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C863_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEC91037.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
L2_039_362G1_scaffold_489_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13515..15068)
DNA (1554bp) protein (518aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Ribonuclease Y n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C864_9FIRM
phosphodiesterase
L2_039_362G1_scaffold_489_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15188..16021)
DNA (834bp) protein (278aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C865_9FIRM
L2_039_362G1_scaffold_489_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(16069..16239)
DNA (171bp) protein (57aa)
50S ribosomal protein L32 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C866_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L32P
L2_039_362G1_scaffold_489_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16251..16760)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C867_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91041.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_489_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16848..17858
DNA (1011bp) protein (337aa)
UPF0348 protein EUBIFOR_00372 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C868_9FIRM
UPF0348 protein EUBIFOR_00372 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_489_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17848..18390
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C869_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91043.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
protein of unknown function DUF218
Displaying 17 items

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