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L2_039_362G1_scaffold_862

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_862_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..113)
DNA (111bp) protein (37aa)
pgm5; phosphoglycerate mutase (EC:5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D5_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEC91331.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_862_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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332..895
DNA (564bp) protein (188aa)
Putative manganese efflux pump MntP n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D4_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted membrane protein
L2_039_362G1_scaffold_862_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(907..1407)
DNA (501bp) protein (167aa)
GDSL-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D3_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EEC91329.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_862_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1407..2426)
DNA (1020bp) protein (340aa)
MATE efflux family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEC91328.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
putative efflux protein, MATE family
L2_039_362G1_scaffold_862_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2493..2750)
DNA (258bp) protein (86aa)
MATE efflux family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEC91328.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
putative efflux protein, MATE family
L2_039_362G1_scaffold_862_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2852..4144)
DNA (1293bp) protein (431aa)
ltrA1; group II intron-encoded protein LtrA (EC:3.1.-.-)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CEC9_9FIRM
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EEC88879.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_862_7
unknown

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comp(4182..4415)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_039_362G1_scaffold_862_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4992..5306)
DNA (315bp) protein (105aa)
Twitching motility protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D1_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EEC91327.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
pilus retraction protein PilT
L2_039_362G1_scaffold_862_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5251..5376)
DNA (126bp) protein (42aa)
Twitching motility protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D1_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EEC91327.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_862_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5376..6014)
DNA (639bp) protein (213aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7C3_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EEC91319.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
SARP family transcriptional regulator
L2_039_362G1_scaffold_862_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6239..6502)
DNA (264bp) protein (88aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7C3_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EEC91319.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_862_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6609..7088)
DNA (480bp) protein (160aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7C2_9FIRM
L2_039_362G1_scaffold_862_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7096..7959)
DNA (864bp) protein (288aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7C1_9FIRM
L2_039_362G1_scaffold_862_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7946..8779)
DNA (834bp) protein (278aa)
Cof-like hydrolase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7C0_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEC91357.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
HAD-superfamily hydrolase, subfamily IIB
L2_039_362G1_scaffold_862_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8783..10162)
DNA (1380bp) protein (460aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
M18 family aminopeptidase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7B9_9FIRM
putative M18 family aminopeptidase 1
L2_039_362G1_scaffold_862_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10159..10935)
DNA (777bp) protein (259aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7B8_9FIRM
L2_039_362G1_scaffold_862_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11011..11394)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91354.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_862_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11759..12265)
DNA (507bp) protein (169aa)
Hydrolase, NUDIX family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7B6_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEC91353.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ADP-ribose pyrophosphatase
Displaying 18 items

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