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L2_039_362G1_scaffold_2304

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_2304_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(67..1887)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89695.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
mRNA degradation ribonucleases J1/J2
L2_039_362G1_scaffold_2304_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1962..2513)
DNA (552bp) protein (184aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Peptide deformylase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC43_9FIRM
peptide deformylase
L2_039_362G1_scaffold_2304_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2611..3819
DNA (1209bp) protein (403aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC42_9FIRM
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EEC89693.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Bacterial cell division membrane protein
L2_039_362G1_scaffold_2304_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3816..4364
DNA (549bp) protein (183aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EEC89692.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEC89692.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
RNA methyltransferase, RsmD family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC41_9FIRM
RNA methyltransferase, RsmD family
L2_039_362G1_scaffold_2304_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4367..4843
DNA (477bp) protein (159aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC40_9FIRM
coaD; Phosphopantetheine adenylyltransferase
L2_039_362G1_scaffold_2304_6
Firmicutes bacterium M10-2, Firmicutes, Bacteria

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4845..5126
DNA (282bp) protein (94aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LSW4_9FIRM
Displaying 6 items

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