ggKbase home page

L2_039_362G1_scaffold_1033

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_362G1_scaffold_1033_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(111..2315)
DNA (2205bp) protein (735aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C870_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:EEC91044.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_362G1_scaffold_1033_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2349..2909)
DNA (561bp) protein (187aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C871_9FIRM
L2_039_362G1_scaffold_1033_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2902..4455)
DNA (1554bp) protein (518aa)
Putative single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C872_9FIRM
Putative single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EEC91046.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
single-stranded-DNA-specific exonuclease
L2_039_362G1_scaffold_1033_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4495..5505)
DNA (1011bp) protein (337aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C873_9FIRM
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
L2_039_362G1_scaffold_1033_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5511..6089)
DNA (579bp) protein (193aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C874_9FIRM
Holliday junction DNA helicase subunit RuvA
L2_039_362G1_scaffold_1033_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6091..6840)
DNA (750bp) protein (250aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EEC91049.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EEC91049.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C875_9FIRM
L2_039_362G1_scaffold_1033_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6903..8183)
DNA (1281bp) protein (427aa)
GTPase Obg n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C876_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Obg family GTPase CgtA
L2_039_362G1_scaffold_1033_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(8248..8532)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C877_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L27P
L2_039_362G1_scaffold_1033_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8536..8850)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C878_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91052.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_1033_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(8853..9155)
DNA (303bp) protein (101aa)
50S ribosomal protein L21 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C879_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L21P
L2_039_362G1_scaffold_1033_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9361..9993)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89435.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_362G1_scaffold_1033_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10138..10476)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89436.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Displaying 12 items

View Taxonomy