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L2_040_000G1_scaffold_283

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Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_000G1_scaffold_283_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..81
DNA (81bp) protein (27aa)
UPI0003D5974F related cluster n=1 Tax=unknown RepID=UPI0003D5974F
Uncharacterized protein {ECO:0000313|EMBL:ETI82141.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_040_000G1_scaffold_283_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(701..1693)
DNA (993bp) protein (331aa)
UPI0003D5AF26 related cluster n=1 Tax=unknown RepID=UPI0003D5AF26
Uncharacterized protein {ECO:0000313|EMBL:ETI82140.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_040_000G1_scaffold_283_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2038..5298)
DNA (3261bp) protein (1087aa)
UPI0003D5AC67 related cluster n=1 Tax=unknown RepID=UPI0003D5AC67
Uncharacterized protein {ECO:0000313|EMBL:ETI82139.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
exo-alpha-sialidase
L2_040_000G1_scaffold_283_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5592..6407
DNA (816bp) protein (272aa)
UPI0003D5A166 related cluster n=1 Tax=unknown RepID=UPI0003D5A166
Uncharacterized protein {ECO:0000313|EMBL:ETI82138.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_040_000G1_scaffold_283_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6478..9915
DNA (3438bp) protein (1146aa)
UPI0003D67FD3 related cluster n=1 Tax=unknown RepID=UPI0003D67FD3
Uncharacterized protein {ECO:0000313|EMBL:ETI82137.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_040_000G1_scaffold_283_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10080..13718
DNA (3639bp) protein (1213aa)
hexa; beta-hexosaminidase A (EC:3.2.1.52)
UPI0003D5B34C related cluster n=1 Tax=unknown RepID=UPI0003D5B34C
Uncharacterized protein {ECO:0000313|EMBL:ETI82136.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_040_000G1_scaffold_283_7

Not on your lists

comp(14133..16199)
DNA (2067bp) protein (689aa)
UPI0003D5FB1D related cluster n=1 Tax=unknown RepID=UPI0003D5FB1D
Uncharacterized protein {ECO:0000313|EMBL:ETJ45579.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
collagen adhesion protein
L2_040_000G1_scaffold_283_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16675..17298
DNA (624bp) protein (208aa)
UPI0003D61778 related cluster n=1 Tax=unknown RepID=UPI0003D61778
Putative phosphate transport regulator {ECO:0000313|EMBL:ETI82134.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_040_000G1_scaffold_283_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17302..18348
DNA (1047bp) protein (349aa)
UPI0003D63558 related cluster n=1 Tax=unknown RepID=UPI0003D63558
Uncharacterized protein {ECO:0000313|EMBL:ETI82133.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pitA; PiT family inorganic phosphate transporter
L2_040_000G1_scaffold_283_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18363..18836
DNA (474bp) protein (158aa)
UPI0003D5A9F9 related cluster n=1 Tax=unknown RepID=UPI0003D5A9F9
Uncharacterized protein {ECO:0000313|EMBL:ETI82132.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_040_000G1_scaffold_283_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19004..21016
DNA (2013bp) protein (671aa)
UPI0003D63E4B related cluster n=1 Tax=unknown RepID=UPI0003D63E4B
Uncharacterized protein {ECO:0000313|EMBL:ETI82131.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ferrous iron transporter FeoB
L2_040_000G1_scaffold_283_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21238..21504
DNA (267bp) protein (89aa)
UPI0003D631DA related cluster n=1 Tax=unknown RepID=UPI0003D631DA
FeoA protein {ECO:0000313|EMBL:ETI82129.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
FeoA domain.
L2_040_000G1_scaffold_283_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(21772..22488)
DNA (717bp) protein (239aa)
UPI0003D6487A related cluster n=1 Tax=unknown RepID=UPI0003D6487A
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L1
L2_040_000G1_scaffold_283_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(22569..23003)
DNA (435bp) protein (145aa)
UPI0003D66304 related cluster n=1 Tax=unknown RepID=UPI0003D66304
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplK; 50S ribosomal protein L11
L2_040_000G1_scaffold_283_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23166..24074)
DNA (909bp) protein (303aa)
UPI0003D6382A related cluster n=1 Tax=unknown RepID=UPI0003D6382A
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
transcription antitermination protein
L2_040_000G1_scaffold_283_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24089..24337)
DNA (249bp) protein (83aa)
UPI0003D5D5E6 related cluster n=1 Tax=unknown RepID=UPI0003D5D5E6
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
preprotein translocase subunit SecE
L2_040_000G1_scaffold_283_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24707..25924
DNA (1218bp) protein (406aa)
aspC; aspartate transaminase (EC:2.6.1.1)
UPI0003D62C76 related cluster n=1 Tax=unknown RepID=UPI0003D62C76
Uncharacterized protein {ECO:0000313|EMBL:ETI82124.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_040_000G1_scaffold_283_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26020..26223
DNA (204bp) protein (68aa)
UPI0003D692E2 related cluster n=1 Tax=unknown RepID=UPI0003D692E2
Uncharacterized protein {ECO:0000313|EMBL:ETI82123.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_040_000G1_scaffold_283_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26216..28036
DNA (1821bp) protein (607aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D60888 related cluster n=1 Tax=unknown RepID=UPI0003D60888
histidine kinase
L2_040_000G1_scaffold_283_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28040..28711
DNA (672bp) protein (224aa)
UPI0003D66C50 related cluster n=1 Tax=unknown RepID=UPI0003D66C50
Two-component system response regulator {ECO:0000313|EMBL:ETI82121.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
two-component system response regulator
L2_040_000G1_scaffold_283_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28823..30985
DNA (2163bp) protein (721aa)
UPI0003D63B74 related cluster n=1 Tax=unknown RepID=UPI0003D63B74
Uncharacterized protein {ECO:0000313|EMBL:ETI82120.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_040_000G1_scaffold_283_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31214..31951
DNA (738bp) protein (246aa)
UPI0003D5A08D related cluster n=1 Tax=unknown RepID=UPI0003D5A08D
Uncharacterized protein {ECO:0000313|EMBL:ETI82119.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glycerophosphoryl diester phosphodiesterase
L2_040_000G1_scaffold_283_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32068..33417
DNA (1350bp) protein (450aa)
UPI0003D666FD related cluster n=1 Tax=unknown RepID=UPI0003D666FD
Uncharacterized protein {ECO:0000313|EMBL:ETI82118.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
major facilitator superfamily protein
L2_040_000G1_scaffold_283_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33503..34774)
DNA (1272bp) protein (424aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5A66A related cluster n=1 Tax=unknown RepID=UPI0003D5A66A
UDP-N-acetylenolpyruvoylglucosamine reductase
L2_040_000G1_scaffold_283_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34784..35785)
DNA (1002bp) protein (334aa)
UPI0003D597E6 related cluster n=1 Tax=unknown RepID=UPI0003D597E6
Uncharacterized protein {ECO:0000313|EMBL:ETI82116.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
deoR2; DeoR family transcriptional regulator
L2_040_000G1_scaffold_283_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35974..36795
DNA (822bp) protein (274aa)
UPI0003D6936C related cluster n=1 Tax=unknown RepID=UPI0003D6936C
MIP family glycerol uptake facilitator protein GlpF {ECO:0000313|EMBL:ETI82115.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
major intrinsic protein
L2_040_000G1_scaffold_283_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36855..38381
DNA (1527bp) protein (509aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00030041}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00030041};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glpK; glycerol kinase (EC:2.7.1.30)
UPI0003D66CD0 related cluster n=1 Tax=unknown RepID=UPI0003D66CD0
L2_040_000G1_scaffold_283_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38598..39959)
DNA (1362bp) protein (454aa)
UPI0003D6349F related cluster n=1 Tax=unknown RepID=UPI0003D6349F
Uncharacterized protein {ECO:0000313|EMBL:ETI82113.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
peptidase U32
L2_040_000G1_scaffold_283_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40252..41184)
DNA (933bp) protein (311aa)
UPI0003D6898E related cluster n=1 Tax=unknown RepID=UPI0003D6898E
Uncharacterized protein {ECO:0000313|EMBL:ETI82112.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
L2_040_000G1_scaffold_283_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41177..42184)
DNA (1008bp) protein (336aa)
UPI0003D68861 related cluster n=1 Tax=unknown RepID=UPI0003D68861
Uncharacterized protein {ECO:0000313|EMBL:ETI82111.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
Displaying items 1-30 of 56 in total

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