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L2_040_010G1_scaffold_59

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_010G1_scaffold_59_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..623)
DNA (621bp) protein (207aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=10 Tax=Staphylococcus epidermidis RepID=C5QVE1_STAEP
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
L2_040_010G1_scaffold_59_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(740..1267)
DNA (528bp) protein (176aa)
Uncharacterized protein n=50 Tax=Staphylococcus epidermidis RepID=Q5HQZ0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53804.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_59_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1384..2274
DNA (891bp) protein (297aa)
Lipoprotein, putative n=46 Tax=Staphylococcus epidermidis RepID=Q5HQY9_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58042.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_59_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2423..2743
DNA (321bp) protein (107aa)
Uncharacterized protein n=77 Tax=Staphylococcus epidermidis RepID=Q5HQY8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53806.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_59_5

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2879..4144
DNA (1266bp) protein (422aa)
Glycerate kinase n=4 Tax=Staphylococcus epidermidis RepID=C5QVE5_STAEP
Glycerate kinase {ECO:0000313|EMBL:ETJ18286.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
glycerate kinase
L2_040_010G1_scaffold_59_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4147..5397)
DNA (1251bp) protein (417aa)
Tripeptide aminopeptidase (EC:3.4.11.4)
Peptidase T {ECO:0000255|HAMAP-Rule:MF_00550}; EC=3.4.11.4 {ECO:0000255|HAMAP-Rule:MF_00550};; Aminotripeptidase {ECO:0000255|HAMAP-Rule:MF_00550}; Short=Tripeptidase {ECO:0000255|HAMAP-Rule:MF_00550};; Tripeptide aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00550}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Peptidase T n=42 Tax=Staphylococcus epidermidis RepID=PEPT_STAEQ
L2_040_010G1_scaffold_59_7

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comp(5418..5912)
DNA (495bp) protein (165aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=Q8CTF7_STAES
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ETJ18284.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_59_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5928..6689)
DNA (762bp) protein (254aa)
Membrane protein, putative n=56 Tax=Staphylococcus epidermidis RepID=Q5HQY4_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58047.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_59_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6884..7981)
DNA (1098bp) protein (366aa)
Diguanylate cyclase (GGDEF) domain protein n=24 Tax=Staphylococcus epidermidis RepID=C5QVE9_STAEP
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFE58048.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
GGDEF domain-containing protein
L2_040_010G1_scaffold_59_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8300..9379
DNA (1080bp) protein (360aa)
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC:2.7.8.-)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EFE58049.1}; EC=2.7.8.- {ECO:0000313|EMBL:EFE58049.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Glycosyltransferase, group 4 family n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0TVS8_STAEP
L2_040_010G1_scaffold_59_11

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comp(9440..10081)
DNA (642bp) protein (214aa)
Uncharacterized protein n=50 Tax=Staphylococcus epidermidis RepID=Q5HQY1_STAEQ
hypothetical conserved protein COG1739
Uncharacterized protein {ECO:0000313|EMBL:ETJ18280.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_59_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10226..11092
DNA (867bp) protein (289aa)
DegV family protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HQY0_STAEQ
Hypothetical protein DUF194, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:EFE58051.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_59_13

Not on your lists

11416..12498
DNA (1083bp) protein (361aa)
ComF operon protein 1, putative n=46 Tax=Staphylococcus epidermidis RepID=Q5HQX9_STAEQ
ComF operon protein A, DNA transporter ATPase
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:ETJ18278.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_59_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12491..13165
DNA (675bp) protein (225aa)
ComF operon protein 3 n=40 Tax=Staphylococcus epidermidis RepID=Q5HQX8_STAEQ
competence protein ComF
ComF operon protein 3 {ECO:0000313|EMBL:AAW53824.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_59_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13226..13795
DNA (570bp) protein (190aa)
Uncharacterized protein SERP0419 n=54 Tax=Staphylococcus epidermidis RepID=Y419_STAEQ
ribosomal subunit interface protein
Uncharacterized protein SE_0534; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L2_040_010G1_scaffold_59_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14461..16995
DNA (2535bp) protein (845aa)
Protein translocase subunit SecA 1 n=43 Tax=Staphylococcus epidermidis RepID=SECA1_STAEQ
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_59_17

Not on your lists

17306..18307
DNA (1002bp) protein (334aa)
Peptide chain release factor 2 n=55 Tax=Staphylococcus epidermidis RepID=RF2_STAEQ
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000313|EMBL:ETJ18274.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_59_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18647..19447
DNA (801bp) protein (267aa)
LysM domain protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HQX4_STAEQ
LysM domain protein
LysM domain protein {ECO:0000313|EMBL:AAW53836.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_59_19

Not on your lists

19756..20397
DNA (642bp) protein (214aa)
HD domain protein, putative n=39 Tax=Staphylococcus epidermidis RepID=Q5HQX3_STAEQ
Nucleotidase YfbR, HD superfamily
HAD superfamily hydrolase {ECO:0000313|EMBL:ETJ18272.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_59_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20403..20636
DNA (234bp) protein (78aa)
Uncharacterized protein n=52 Tax=Staphylococcus epidermidis RepID=Q5HQX2_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58059.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_59_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21193..23178
DNA (1986bp) protein (662aa)
UvrABC system protein B n=17 Tax=Staphylococcus epidermidis RepID=UVRB_STAES
UvrABC system protein B {ECO:0000255|HAMAP-Rule:MF_00204}; Short=Protein UvrB {ECO:0000255|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000255|HAMAP-Rule:MF_00204}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
excinuclease ABC subunit B
L2_040_010G1_scaffold_59_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23186..26020
DNA (2835bp) protein (945aa)
UvrABC system protein A n=40 Tax=Staphylococcus epidermidis RepID=UVRA_STAEQ
Excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_59_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26375..27307
DNA (933bp) protein (311aa)
HPr kinase/phosphorylase (EC:2.7.1.-)
HPr kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; Short=HPrK/P {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.4.- {ECO:0000255|HAMAP-Rule:MF_01249};; HPr(Ser) kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
HPr kinase/phosphorylase n=49 Tax=Staphylococcus epidermidis RepID=HPRK_STAEQ
L2_040_010G1_scaffold_59_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27313..28152
DNA (840bp) protein (280aa)
Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Prolipoprotein diacylglyceryl transferase n=23 Tax=Staphylococcus epidermidis RepID=LGT_STAES
prolipoprotein diacylglyceryl transferase
L2_040_010G1_scaffold_59_25

Not on your lists

28149..28685
DNA (537bp) protein (179aa)
O-acetyltransferase n=19 Tax=Staphylococcus epidermidis RepID=Q8CTE5_STAES
O-acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ETJ18266.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_59_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28652..30091
DNA (1440bp) protein (480aa)
Tetratricopeptide repeat protein n=4 Tax=Staphylococcus epidermidis RepID=H3VGX4_STAEP
hypothetical protein
YvcD protein {ECO:0000313|EMBL:AAW53853.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_59_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30156..31088
DNA (933bp) protein (311aa)
Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase; Short=TRXR;; EC=1.8.1.9;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Thioredoxin reductase n=51 Tax=Staphylococcus epidermidis RepID=TRXB_STAEQ
L2_040_010G1_scaffold_59_28

Not on your lists

31264..32172
DNA (909bp) protein (303aa)
UPF0042 nucleotide-binding protein SEVCU041_2014 n=10 Tax=Staphylococcus epidermidis RepID=H3UFK8_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ18263.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
P-loop ATPase family protein
L2_040_010G1_scaffold_59_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32172..33167
DNA (996bp) protein (332aa)
Gluconeogenesis factor n=49 Tax=Staphylococcus epidermidis RepID=Q8CTE2_STAES
Hypothetical protein UPF0052
Gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_59_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33296..34240
DNA (945bp) protein (315aa)
Putative sporulation transcription regulator WhiA n=48 Tax=Staphylococcus epidermidis RepID=WHIA_STAEQ
Cytoplasmic hypothetical protein DUF199
Putative sporulation transcription regulator WhiA {ECO:0000255|HAMAP-Rule:MF_01420}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Displaying items 1-30 of 68 in total

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