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L2_040_010G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_010G1_scaffold_68_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(102..683)
DNA (582bp) protein (194aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; EC=2.7.8.5;; Phosphatidylglycerophosphate synthase; Short=PGP synthase;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=16 Tax=Staphylococcus epidermidis RepID=PGSA_STAEQ
L2_040_010G1_scaffold_68_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(712..1104)
DNA (393bp) protein (131aa)
Transcriptional regulator, Cro/CI family n=52 Tax=Staphylococcus epidermidis RepID=Q5HPQ9_STAEQ
hypothetical protein
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EFE59425.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_68_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1123..1950)
DNA (828bp) protein (276aa)
ACT domain protein n=17 Tax=Staphylococcus epidermidis RepID=Q5HPR0_STAEQ
ACT domain protein
ACT domain protein {ECO:0000313|EMBL:AAW54225.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_68_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2103..2807)
DNA (705bp) protein (235aa)
3-oxoacyl-[acyl-carrier protein] reductase paralog in cluster with unspecified monosaccharide transporter (EC:1.1.1.100)
Short chain dehydrogenase/reductase family protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HPR1_STAEQ
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFE59427.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_68_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2804..4093)
DNA (1290bp) protein (430aa)
Peptidase, M16 family n=46 Tax=Staphylococcus epidermidis RepID=Q5HPR2_STAEQ
FIG009210: peptidase, M16 family
Peptidase, M16 family {ECO:0000313|EMBL:AAW54223.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_68_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4093..5364)
DNA (1272bp) protein (424aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EFE59429.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFE59429.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HPR3_STAEQ
FIG001621: Zinc protease
L2_040_010G1_scaffold_68_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5395..6108)
DNA (714bp) protein (238aa)
Transcriptional regulator, putative n=49 Tax=Staphylococcus epidermidis RepID=Q5HPR4_STAEQ
Transcriptional regulator in cluster with Zn-dependent hydrolase
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFE59430.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_68_8
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6111..8504)
DNA (2394bp) protein (798aa)
DNA translocase FtsK n=36 Tax=Staphylococcus epidermidis RepID=FTSK_STAEQ
DNA translocase FtsK {ECO:0000313|EMBL:ETJ13464.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
DNA translocase FtsK
L2_040_010G1_scaffold_68_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8770..10476)
DNA (1707bp) protein (569aa)
Ribonuclease J {ECO:0000256|PIRNR:PIRNR004803}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR004803};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ribonuclease J n=36 Tax=Staphylococcus epidermidis RepID=V4QRT5_STAEP
metallo-beta-lactamase
L2_040_010G1_scaffold_68_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10811..12916)
DNA (2106bp) protein (702aa)
pnp; polynucleotide phosphorylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase {ECO:0000255|HAMAP-Rule:MF_01595};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Polyribonucleotide nucleotidyltransferase n=49 Tax=Staphylococcus epidermidis RepID=PNP_STAEQ
L2_040_010G1_scaffold_68_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(13048..13317)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=75 Tax=Staphylococcus epidermidis RepID=RS15_STAEQ
SSU ribosomal protein S15p (S13e)
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_040_010G1_scaffold_68_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13437..14408)
DNA (972bp) protein (324aa)
Riboflavin kinase / FMN adenylyltransferase (EC:2.7.1.26)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Riboflavin biosynthesis protein RibF n=55 Tax=Staphylococcus epidermidis RepID=Q5HPR9_STAEQ
L2_040_010G1_scaffold_68_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14424..15341)
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
truB; tRNA pseudouridine(55) synthase (EC:5.4.99.25)
tRNA pseudouridine synthase B n=24 Tax=Staphylococcus epidermidis RepID=D4FJI5_STAEP
L2_040_010G1_scaffold_68_14
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15479..15829)
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=41 Tax=Staphylococcus epidermidis RepID=RBFA_STAEQ
Ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_040_010G1_scaffold_68_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16132..18294)
DNA (2163bp) protein (721aa)
Translation initiation factor IF-2 n=33 Tax=Staphylococcus epidermidis RepID=D4FJI7_STAEP
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Translation initiation factor 2
L2_040_010G1_scaffold_68_16
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18299..18616)
DNA (318bp) protein (106aa)
30S ribosomal protein L7Ae, putative n=52 Tax=Staphylococcus epidermidis RepID=Q5HPS3_STAEQ
50S ribosomal protein L7
Ribosomal protein L7/L12 {ECO:0000313|EMBL:ETJ09095.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_040_010G1_scaffold_68_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18616..18900)
DNA (285bp) protein (95aa)
Uncharacterized protein n=72 Tax=Staphylococcus epidermidis RepID=Q5HPS4_STAEQ
COG2740: Predicted nucleic-acid-binding protein implicated in transcription termination
Uncharacterized protein {ECO:0000313|EMBL:AAW54195.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_68_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18918..20141)
DNA (1224bp) protein (408aa)
Transcription termination factor NusA n=23 Tax=Staphylococcus epidermidis RepID=D4FJJ0_STAEP
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Transcription termination protein NusA
L2_040_010G1_scaffold_68_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20162..20629)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=43 Tax=Staphylococcus epidermidis RepID=RIMP_STAEQ
COG0779: clustered with transcription termination protein NusA
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_68_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20808..25118)
DNA (4311bp) protein (1437aa)
DNA polymerase III alpha subunit (EC:2.7.7.7)
DNA polymerase III PolC-type {ECO:0000255|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000255|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_00356};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
DNA polymerase III PolC-type n=6 Tax=Staphylococcus epidermidis RepID=DPO3_STAES
L2_040_010G1_scaffold_68_21
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25368..27071)
DNA (1704bp) protein (568aa)
Prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Proline--tRNA ligase n=45 Tax=Staphylococcus epidermidis RepID=SYP_STAEQ
L2_040_010G1_scaffold_68_22
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27090..28376)
DNA (1287bp) protein (429aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Membrane-associated zinc metalloprotease, putative n=55 Tax=Staphylococcus epidermidis RepID=Q5HPS9_STAEQ
Membrane-associated zinc metalloprotease
L2_040_010G1_scaffold_68_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28610..29392)
DNA (783bp) protein (261aa)
Phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Phosphatidate cytidylyltransferase n=75 Tax=Staphylococcus epidermidis RepID=CDSA_STAEQ
L2_040_010G1_scaffold_68_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29396..30166)
DNA (771bp) protein (257aa)
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Isoprenyl transferase n=47 Tax=Staphylococcus RepID=ISPT_STAEQ
L2_040_010G1_scaffold_68_25

Not on your lists

comp(30387..30941)
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=44 Tax=Staphylococcus epidermidis RepID=RRF_STAEQ
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000313|EMBL:ETJ16239.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_68_26

Not on your lists

comp(30958..31680)
DNA (723bp) protein (241aa)
Uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=81 Tax=Staphylococcus RepID=PYRH_STAEQ
Uridylate kinase {ECO:0000313|EMBL:ETJ16240.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_68_27

Not on your lists

comp(31821..32699)
DNA (879bp) protein (293aa)
Elongation factor Ts n=55 Tax=Staphylococcus epidermidis RepID=EFTS_STAEQ
Translation elongation factor Ts
Elongation factor Ts {ECO:0000313|EMBL:ETJ16241.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_68_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(32851..33639)
DNA (789bp) protein (263aa)
30S ribosomal protein S2 n=67 Tax=Staphylococcus epidermidis RepID=RS2_STAEQ
SSU ribosomal protein S2p (SAe)
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_68_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33998..34771)
DNA (774bp) protein (258aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=47 Tax=Staphylococcus epidermidis RepID=CODY_STAES
transcriptional repressor CodY
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000255|HAMAP-Rule:MF_00621}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L2_040_010G1_scaffold_68_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34795..36198)
DNA (1404bp) protein (468aa)
ATP-dependent protease ATPase subunit HslU n=47 Tax=Staphylococcus epidermidis RepID=HSLU_STAEQ
ATP-dependent hsl protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Displaying items 1-30 of 42 in total

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