ggKbase home page

L2_040_010G1_scaffold_68

Search features with annotation key words

Displaying items 31-42 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_010G1_scaffold_68_31
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36267..36809)
DNA (543bp) protein (181aa)
ATP-dependent protease HslV (EC:3.4.25.-)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
ATP-dependent protease subunit HslV n=55 Tax=Staphylococcus epidermidis RepID=HSLV_STAEQ
L2_040_010G1_scaffold_68_32
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36813..37703)
DNA (891bp) protein (297aa)
Tyrosine recombinase XerC n=65 Tax=Staphylococcus epidermidis RepID=XERC_STAEQ
xerC protein
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_040_010G1_scaffold_68_33
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37928..39235)
DNA (1308bp) protein (436aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=40 Tax=Staphylococcus epidermidis RepID=TRMFO_STAEQ
tRNA:m(5)U-54 MTase gid
L2_040_010G1_scaffold_68_34
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(39260..41329)
DNA (2070bp) protein (690aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
DNA topoisomerase 1 n=46 Tax=Staphylococcus epidermidis RepID=TOP1_STAEQ
L2_040_010G1_scaffold_68_35
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(41512..42369)
DNA (858bp) protein (286aa)
DNA protecting protein DprA n=9 Tax=Staphylococcus epidermidis RepID=H3UH38_STAEP
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
DNA processing protein DprA, putative {ECO:0000313|EMBL:AAW54161.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_68_36
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(43189..44097)
DNA (909bp) protein (303aa)
Succinyl-CoA ligase [ADP-forming] alpha chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=62 Tax=Staphylococcus epidermidis RepID=SUCD_STAEQ
L2_040_010G1_scaffold_68_37
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(44119..45285)
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] beta chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; Short=SCS-beta {ECO:0000255|HAMAP-Rule:MF_00558};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=62 Tax=Staphylococcus epidermidis RepID=SUCC_STAEQ
L2_040_010G1_scaffold_68_38
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(45393..46163)
DNA (771bp) protein (257aa)
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Ribonuclease HII n=48 Tax=Staphylococcus epidermidis RepID=RNH2_STAEQ
L2_040_010G1_scaffold_68_39
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(46168..47031)
DNA (864bp) protein (288aa)
Ribosome biogenesis GTPase A n=13 Tax=Staphylococcus epidermidis RepID=Q5HPU7_STAEQ
rbgA; ribosomal biogenesis GTPase
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_68_40
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(47052..47216)
DNA (165bp) protein (55aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=Q5HPU8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54148.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_68_41
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

47360..49960
DNA (2601bp) protein (867aa)
Bacterial membrane protein YfhO n=4 Tax=Staphylococcus epidermidis RepID=H3V0S0_STAEP
Uncharacterized protein {ECO:0000313|EMBL:AAW54147.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
hypothetical protein
L2_040_010G1_scaffold_68_42
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

49953..50291
DNA (339bp) protein (113aa)
Bacterial membrane protein YfhO n=3 Tax=Staphylococcus epidermidis RepID=H3W628_STAEP
bacterial membrane YfhO family protein
Bacterial membrane protein YfhO {ECO:0000313|EMBL:EFE59464.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 31-42 of 42 in total

View Taxonomy