ggKbase home page

L2_040_010G1_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_010G1_scaffold_72_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..354)
DNA (354bp) protein (118aa)
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=Q8CTY7_STAES
pyridine nucleotide-disulfide oxidoreductase family protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53211.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

611..1606
DNA (996bp) protein (332aa)
ABC transporter, substrate-binding protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0JVD3_STAEP
Zn-binding lipoprotein adcA
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EFE58820.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_72_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2020..2925
DNA (906bp) protein (302aa)
ApbE family protein n=3 Tax=Staphylococcus epidermidis RepID=J1E0Y0_STAEP
Thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:ETJ13275.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
apbE family protein
L2_040_010G1_scaffold_72_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3007..6024
DNA (3018bp) protein (1006aa)
Flavocytochrome c n=5 Tax=Staphylococcus epidermidis RepID=H3UF74_STAEP
NADH:flavin oxidoreductase/fumarate reductase, flavoprotein subunit
NADH:flavin oxidoreductase/fumarate reductase, flavoprotein subunit, putative {ECO:0000313|EMBL:AAW53208.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6053..7429
DNA (1377bp) protein (459aa)
Quinolone resistance protein NorB n=9 Tax=Staphylococcus epidermidis RepID=F9LKY2_STAEP
hypothetical protein
Quinolone resistance protein NorB {ECO:0000313|EMBL:EFE58817.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_72_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7598..8371
DNA (774bp) protein (258aa)
Diacetyl reductase [(S)-acetoin forming]; EC=1.1.1.304;; Acetoin(diacetyl) reductase; Short=AR;; Meso-2,3-butanediol dehydrogenase; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Diacetyl reductase ((R)-acetoin forming) n=2 Tax=Staphylococcus epidermidis RepID=J1AEX4_STAEP
acetoin(diacetyl)reductase
L2_040_010G1_scaffold_72_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8499..9188)
DNA (690bp) protein (230aa)
ABC transporter, ATP-binding protein n=3 Tax=Staphylococcus epidermidis RepID=J0GNA4_STAEP
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAW53205.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9203..9649)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM008 RepID=J1BJH3_STAEP
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:AAW53197.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9837..10676
DNA (840bp) protein (280aa)
Diaminopimelate epimerase family protein n=32 Tax=Staphylococcus epidermidis RepID=Q5HKH0_STAEQ
Diaminopimelate epimerase homolog
Diaminopimelate epimerase family protein {ECO:0000313|EMBL:AAW53195.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10673..11488
DNA (816bp) protein (272aa)
Uncharacterized protein n=7 Tax=Staphylococcus RepID=Q5HKH1_STAEQ
Similar to nicotianamine synthase
Uncharacterized protein {ECO:0000313|EMBL:AAW53194.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11481..12773
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E0M1_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53193.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12824..14422
DNA (1599bp) protein (533aa)
Nickel ABC transporter, periplasmic nickel-binding protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0JVC1_STAEP
peptide ABC transporter substrate-binding protein
Peptide ABC transporter, peptide-binding protein {ECO:0000313|EMBL:AAW53192.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14435..15370
DNA (936bp) protein (312aa)
ABC transporter, permease protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E0X1_STAEP
peptide ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:ETJ13285.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_040_010G1_scaffold_72_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15367..16245
DNA (879bp) protein (293aa)
Peptide ABC transporter, permease protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HKH5_STAEQ
Oligopeptide transporter putative membrane permease domain
Peptide ABC transporter, permease protein {ECO:0000313|EMBL:AAW53190.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16232..17047
DNA (816bp) protein (272aa)
Putative oligopeptide ABC transporter, ATP-binding protein OppD n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J0TPU5_STAEP
peptide ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58807.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_72_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17040..17789
DNA (750bp) protein (250aa)
Peptide ABC transporter, ATP-binding protein n=36 Tax=Staphylococcus epidermidis RepID=Q5HKH7_STAEQ
peptide ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58806.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_72_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17801..18991
DNA (1191bp) protein (397aa)
Transporter, major facilitator family protein n=35 Tax=Staphylococcus epidermidis RepID=C5QB51_STAEP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFE58805.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Antibiotic resistance protein
L2_040_010G1_scaffold_72_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19732..21978
DNA (2247bp) protein (749aa)
Pyruvate formate-lyase (EC:2.3.1.54)
Formate C-acetyltransferase {ECO:0000313|EMBL:EFE58804.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EFE58804.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Formate C-acetyltransferase n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E0W6_STAEP
L2_040_010G1_scaffold_72_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22000..22755
DNA (756bp) protein (252aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
pflA; pyruvate formate-lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=31 Tax=Staphylococcus epidermidis RepID=C5QB53_STAEP
L2_040_010G1_scaffold_72_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22894..24111)
DNA (1218bp) protein (406aa)
Peptidase, ArgE/DapE family {ECO:0000313|EMBL:EFE58802.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFE58802.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Probable succinyl-diaminopimelate desuccinylase n=31 Tax=Staphylococcus RepID=DAPE_STAEQ
succinyl-diaminopimelate desuccinylase
L2_040_010G1_scaffold_72_21

Not on your lists

24465..25823
DNA (1359bp) protein (453aa)
Branched-chain amino acid transport system II carrier protein n=40 Tax=Staphylococcus RepID=Q5HKI2_STAEQ
brnQ-2; branched-chain amino acid ABC transporter substrate-binding protein
LIVCS family amino acid:cation symporter {ECO:0000313|EMBL:ETJ20706.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_72_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26289..26828
DNA (540bp) protein (180aa)
Transcriptional regulator, TetR family n=39 Tax=Staphylococcus epidermidis RepID=Q5HKI3_STAEQ
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFE58800.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_72_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26964..27860
DNA (897bp) protein (299aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q8CTX4_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53166.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27860..28825
DNA (966bp) protein (322aa)
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L-carnitine dehydrogenase n=45 Tax=Staphylococcus epidermidis RepID=LCDH_STAES
3-hydroxyacyl-CoA dehydrogenase
L2_040_010G1_scaffold_72_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28822..29310
DNA (489bp) protein (163aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=J0GYV6_STAEP
Uncharacterized protein {ECO:0000313|EMBL:AAW53164.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_72_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29445..30632
DNA (1188bp) protein (396aa)
Glycine betaine/carnitine/choline ABC transporter (ATP-bindin) opuCA n=29 Tax=Staphylococcus epidermidis RepID=Q8CQB8_STAES
Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA
Glycine/betaine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESV20966.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_040_010G1_scaffold_72_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30629..31264
DNA (636bp) protein (212aa)
OpuCB protein n=48 Tax=Staphylococcus epidermidis RepID=Q8CQB7_STAES
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB
Choline ABC transporter permease {ECO:0000313|EMBL:ESV20967.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_040_010G1_scaffold_72_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31283..32242
DNA (960bp) protein (320aa)
ABC transporter, substrate-binding protein, QAT family {ECO:0000313|EMBL:EFE58794.1}; EC=3.6.3.32 {ECO:0000313|EMBL:EFE58794.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Amino acid ABC transporter, amino acid-binding protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HKI9_STAEQ
Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC
L2_040_010G1_scaffold_72_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32245..32892
DNA (648bp) protein (216aa)
Amino acid ABC transporter, permease protein n=75 Tax=Staphylococcus epidermidis RepID=Q5HKJ0_STAEQ
amino acid ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EES35383.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_040_010G1_scaffold_72_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32933..33700
DNA (768bp) protein (256aa)
Tributyrin esterase n=9 Tax=Staphylococcus epidermidis RepID=J0HNM9_STAEP
Tributyrin esterase
Putative esterase {ECO:0000313|EMBL:EFE58792.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 41 in total

View Taxonomy