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L2_040_010G1_scaffold_98

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_010G1_scaffold_98_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..659)
DNA (657bp) protein (219aa)
budA; alpha-acetolactate decarboxylase (EC:4.1.1.5)
Alpha-acetolactate decarboxylase n=29 Tax=Staphylococcus epidermidis RepID=C5QZT1_STAEP
Alpha-acetolactate decarboxylase {ECO:0000313|EMBL:ESV19655.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_040_010G1_scaffold_98_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(771..2435)
DNA (1665bp) protein (555aa)
Acetolactate synthase, catabolic (EC:2.2.1.6)
Acetolactate synthase, catabolic {ECO:0000313|EMBL:EFE58935.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFE58935.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Acetolactate synthase, catabolic n=49 Tax=Staphylococcus epidermidis RepID=Q5HL32_STAEQ
L2_040_010G1_scaffold_98_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2498..3448)
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000255|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000255|HAMAP-Rule:MF_00488};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L-lactate dehydrogenase n=53 Tax=Staphylococcus epidermidis RepID=LDH_STAEQ
L-lactate dehydrogenase
L2_040_010G1_scaffold_98_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4282..5163)
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR family n=73 Tax=Staphylococcus epidermidis RepID=Q5HL30_STAEQ
LysR family regulatory protein CidR
LysR family transcriptional regulator {ECO:0000313|EMBL:ESV19658.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_040_010G1_scaffold_98_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5707..6429
DNA (723bp) protein (241aa)
Amino acid transporter n=31 Tax=Staphylococcus epidermidis RepID=Q8CMY8_STAES
Amino acid transporter
Amino acid permease {ECO:0000313|EMBL:EFE58938.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_98_6

Not on your lists

6390..7157
DNA (768bp) protein (256aa)
Amino acid permease n=11 Tax=Staphylococcus epidermidis RepID=H3V356_STAEP
amino acid permease family protein
APC family amino acid-polyamine-organocation transporter {ECO:0000313|EMBL:ETJ21306.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_98_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7285..8622)
DNA (1338bp) protein (446aa)
Aminotransferase, class III n=40 Tax=Staphylococcus epidermidis RepID=C5QBP0_STAEP
aminotransferase
Aminotransferase, class III {ECO:0000313|EMBL:EFE58939.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_98_8

Not on your lists

8888..9319
DNA (432bp) protein (144aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=C5QBN8_STAEP
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21304.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_98_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9423..10352)
DNA (930bp) protein (310aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=Q8CR16_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58942.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_98_10

Not on your lists

10624..11214
DNA (591bp) protein (197aa)
Uncharacterized protein n=43 Tax=Staphylococcus epidermidis RepID=Q8CR15_STAES
hypothetical protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:ETJ21302.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_98_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11209..11397)
DNA (189bp) protein (63aa)
transposase n=1 Tax=Staphylococcus epidermidis RepID=UPI000357CFA7
truncated transposase
IS1272, transposase {ECO:0000313|EMBL:EFE58944.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_98_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12007..13368
DNA (1362bp) protein (454aa)
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFE58945.1}; EC=1.11.1.1 {ECO:0000313|EMBL:EFE58945.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NADH peroxidase n=10 Tax=Staphylococcus epidermidis RepID=H3V361_STAEP
hypothetical protein
L2_040_010G1_scaffold_98_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13673..14563
DNA (891bp) protein (297aa)
fda; fructose-bisphosphate aldolase class 1 (EC:4.1.2.13)
Fructose-bisphosphate aldolase class 1 {ECO:0000256|HAMAP-Rule:MF_00729}; EC=4.1.2.13 {ECO:0000256|HAMAP-Rule:MF_00729};; Fructose-bisphosphate aldolase class I {ECO:0000256|HAMAP-Rule:MF_00729}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Fructose-bisphosphate aldolase class 1 n=48 Tax=Staphylococcus epidermidis RepID=ALF1_STAES
L2_040_010G1_scaffold_98_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14696..15619)
DNA (924bp) protein (308aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q8CR13_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58947.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_98_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16014..17543)
DNA (1530bp) protein (510aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Malate:quinone oxidoreductase (EC:1.1.5.4)
Probable malate:quinone oxidoreductase 4 n=60 Tax=Staphylococcus epidermidis RepID=MQO4_STAES
L2_040_010G1_scaffold_98_16
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17722..18540)
DNA (819bp) protein (273aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Putative pyruvate, phosphate dikinase regulatory protein 2 n=51 Tax=Staphylococcus epidermidis RepID=PDRP2_STAEQ
kinase/pyrophosphorylase family protein
L2_040_010G1_scaffold_98_17
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18542..21169)
DNA (2628bp) protein (876aa)
Pyruvate,phosphate dikinase (EC:2.7.9.1)
Phosphoenolpyruvate-protein phosphatase n=36 Tax=Staphylococcus epidermidis RepID=Q8CR11_STAES
Pyruvate phosphate dikinase {ECO:0000313|EMBL:ETJ14103.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_040_010G1_scaffold_98_18
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21517..23112)
DNA (1596bp) protein (532aa)
Acetate-CoA ligase n=43 Tax=Staphylococcus epidermidis RepID=Q8CR10_STAES
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Putative Butyrate-CoA ligase {ECO:0000313|EMBL:ETJ14102.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_040_010G1_scaffold_98_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23449..23895)
DNA (447bp) protein (149aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q8CR09_STAES
hypothetical protein
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EFE58952.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_98_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23923..24141)
DNA (219bp) protein (73aa)
Uncharacterized protein n=46 Tax=Staphylococcus epidermidis RepID=Q8CR08_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58953.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_98_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24588..25763)
DNA (1176bp) protein (392aa)
Amidohydrolase family protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HL12_STAEQ
aminoacylase
Amidohydrolase family protein {ECO:0000313|EMBL:AAW52968.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_98_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26085..27803)
DNA (1719bp) protein (573aa)
betA; choline dehydrogenase (EC:1.1.99.1)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Oxygen-dependent choline dehydrogenase n=79 Tax=Staphylococcus epidermidis RepID=BETA_STAES
L2_040_010G1_scaffold_98_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27963..29453)
DNA (1491bp) protein (497aa)
Betaine aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000256|SAAS:SAAS00007649}; EC=1.2.1.8 {ECO:0000256|SAAS:SAAS00007649};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Betaine aldehyde dehydrogenase n=42 Tax=Staphylococcus epidermidis RepID=Q5HL10_STAEQ
L2_040_010G1_scaffold_98_24

Not on your lists

29922..30485
DNA (564bp) protein (188aa)
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=Q8CR07_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21168.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 24 items

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