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L2_040_010G1_scaffold_103

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_010G1_scaffold_103_1

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comp(12..1352)
DNA (1341bp) protein (447aa)
Glutamine synthetase n=75 Tax=Staphylococcus epidermidis RepID=GLNA_STAEQ
glutamine-ammonia ligase
Glutamine synthetase {ECO:0000313|EMBL:ETJ16274.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_103_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1371..1736)
DNA (366bp) protein (122aa)
Glutamine synthetase repressor n=75 Tax=Staphylococcus epidermidis RepID=Q5HPN3_STAEQ
glnR; glutamine synthetase repressor
MerR family transcriptional regulator {ECO:0000313|EMBL:ESV19336.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_040_010G1_scaffold_103_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2217..3455)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=19 Tax=Staphylococcus RepID=Q5HPN4_STAEQ
Aluminum resistance protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54281.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_103_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3471..4712)
DNA (1242bp) protein (414aa)
GTPase HflX n=23 Tax=Staphylococcus epidermidis RepID=D1WNW9_STAEP
GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_040_010G1_scaffold_103_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4822..5298
DNA (477bp) protein (159aa)
Glutathione peroxidase homolog BsaA; EC=1.-.-.-;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Glutathione peroxidase homolog BsaA n=15 Tax=Staphylococcus epidermidis RepID=BSAA_STAES
Glutathione peroxidase family protein
L2_040_010G1_scaffold_103_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5520..5759)
DNA (240bp) protein (80aa)
RNA-binding protein Hfq n=70 Tax=Staphylococcus epidermidis RepID=Q5HPN7_STAEQ
host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_040_010G1_scaffold_103_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5713..6711)
DNA (999bp) protein (333aa)
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
tRNA dimethylallyltransferase n=41 Tax=Staphylococcus epidermidis RepID=MIAA_STAEQ
L2_040_010G1_scaffold_103_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6723..7649)
DNA (927bp) protein (309aa)
Lysophospholipase ; Monoglyceride lipase ; putative (EC:3.1.1.5)
Hydrolase, alpha/beta hydrolase fold family n=15 Tax=Staphylococcus epidermidis RepID=Q5HPN9_STAEQ
Hydrolase, alpha/beta hydrolase fold family {ECO:0000313|EMBL:AAW54268.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_103_9
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7873..9546)
DNA (1674bp) protein (558aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Aerobic glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Aerobic glycerol-3-phosphate dehydrogenase n=19 Tax=Staphylococcus epidermidis RepID=GLPD_STAEQ
L2_040_010G1_scaffold_103_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9723..11222)
DNA (1500bp) protein (500aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000255|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000255|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000255|HAMAP-Rule:MF_00186}; Short=GK {ECO:0000255|HAMAP-Rule:MF_00186};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Glycerol kinase n=19 Tax=Staphylococcus epidermidis RepID=GLPK_STAEQ
L2_040_010G1_scaffold_103_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11376..12200)
DNA (825bp) protein (275aa)
Glycerol uptake facilitator n=46 Tax=Staphylococcus epidermidis RepID=Q8CPE7_STAES
Glycerol uptake facilitator protein
Glycerol uptake facilitator {ECO:0000313|EMBL:ETJ10827.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_040_010G1_scaffold_103_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12575..13108)
DNA (534bp) protein (178aa)
Glycerol uptake operon antiterminator regulatory protein n=17 Tax=Staphylococcus epidermidis RepID=Q5HPP3_STAEQ
Glycerol uptake operon antiterminator regulatory protein
Glycerol uptake operon antiterminator regulatory protein {ECO:0000256|PIRNR:PIRNR016897}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_103_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13122..15059)
DNA (1938bp) protein (646aa)
UPI0003D67254 related cluster n=1 Tax=unknown RepID=UPI0003D67254
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
DNA mismatch repair protein MutL
L2_040_010G1_scaffold_103_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15074..17695)
DNA (2622bp) protein (874aa)
DNA mismatch repair protein MutS n=1 Tax=Staphylococcus epidermidis VCU081 RepID=H3Z698_STAEP
mutS; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_103_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17893..18387)
DNA (495bp) protein (165aa)
Uncharacterized protein n=75 Tax=Staphylococcus epidermidis RepID=Q5HPP6_STAEQ
hypothetical protein
Protein ThiW {ECO:0000313|EMBL:EES36317.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_040_010G1_scaffold_103_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18411..18776)
DNA (366bp) protein (122aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HPP7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES36316.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_040_010G1_scaffold_103_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18778..20322)
DNA (1545bp) protein (515aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=47 Tax=Staphylococcus epidermidis RepID=MIAB_STAEQ
tRNA-i(6)A37 methylthiotransferase
L2_040_010G1_scaffold_103_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20665..20955)
DNA (291bp) protein (97aa)
Uncharacterized protein n=78 Tax=Staphylococcus epidermidis RepID=Q5HPP9_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54250.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_103_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21012..21629)
DNA (618bp) protein (206aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HPQ0_STAEQ
phage-related protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59416.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_103_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22215..23081)
DNA (867bp) protein (289aa)
2-oxoglutarate oxidoreductase, beta subunit (EC:1.2.7.3)
Pyruvate ferredoxin oxidoreductase, beta subunit n=52 Tax=Staphylococcus epidermidis RepID=Q5HPQ1_STAEQ
Pyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:AAW54241.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_103_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23082..24842)
DNA (1761bp) protein (587aa)
2-oxoglutarate oxidoreductase, alpha subunit (EC:1.2.7.3)
Pyruvate ferredoxin oxidoreductase, alpha subunit n=13 Tax=Staphylococcus epidermidis RepID=Q5HPQ2_STAEQ
Pyruvate ferredoxin oxidoreductase, alpha subunit {ECO:0000313|EMBL:AAW54240.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_103_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24955..25749)
DNA (795bp) protein (265aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HPQ3_STAEQ
Phosphoesterase family protein
Putative metallophosphoesterase {ECO:0000313|EMBL:EFE59419.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_103_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25913..26128
DNA (216bp) protein (72aa)
Uncharacterized protein n=57 Tax=Staphylococcus epidermidis RepID=Q5HPQ4_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54238.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_040_010G1_scaffold_103_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26217..27776)
DNA (1560bp) protein (520aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Ribonuclease Y n=75 Tax=Staphylococcus RepID=RNY_STAEQ
Hydrolase (HAD superfamily)
L2_040_010G1_scaffold_103_25
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(28002..29051)
DNA (1050bp) protein (350aa)
Protein RecA n=64 Tax=Staphylococcus epidermidis RepID=RECA_STAEQ
RecA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Displaying 25 items

View Taxonomy