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L2_040_010G1_scaffold_178

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_010G1_scaffold_178_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2..421)
DNA (420bp) protein (140aa)
Immunodominant antigen B, putative n=38 Tax=Staphylococcus epidermidis RepID=Q5HN44_STAEQ
Immunodominant antigen B
Uncharacterized protein {ECO:0000313|EMBL:EFE58532.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_178_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(862..1587)
DNA (726bp) protein (242aa)
Cobyric acid synthase, putative n=63 Tax=Staphylococcus epidermidis RepID=Q5HN43_STAEQ
Cobyric acid synthase
CobB/CobQ-like protein {ECO:0000313|EMBL:EFE58531.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_178_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1589..2902)
DNA (1314bp) protein (438aa)
Mur ligase middle domain protein n=15 Tax=Staphylococcus epidermidis RepID=D4FMD7_STAEP
Mur ligase middle domain protein {ECO:0000313|EMBL:EFE58530.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
UDP-N-acetylmuramyl tripeptide synthase
L2_040_010G1_scaffold_178_4

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3124..3624
DNA (501bp) protein (167aa)
Ferritin n=70 Tax=Staphylococcus epidermidis RepID=FTN_STAES
ferritin-like domain protein
Ferritin {ECO:0000313|EMBL:ETJ21433.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_178_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3813..4367
DNA (555bp) protein (185aa)
DNA polymerase III polC-type (EC:2.7.7.7)
Exonuclease n=46 Tax=Staphylococcus epidermidis RepID=Q5HN40_STAEQ
Exonuclease {ECO:0000313|EMBL:EFE58528.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_178_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4398..5468)
DNA (1071bp) protein (357aa)
DNA polymerase IV {ECO:0000255|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000255|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_01113};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
DNA polymerase IV n=41 Tax=Staphylococcus epidermidis RepID=DPO4_STAES
hypothetical protein
L2_040_010G1_scaffold_178_7

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comp(5778..6320)
DNA (543bp) protein (181aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HN38_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21436.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_178_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6464..7882)
DNA (1419bp) protein (473aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFE58525.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFE58525.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=3 Tax=Staphylococcus epidermidis RepID=D4FMD2_STAEP
RNA methyltransferase-like protein
L2_040_010G1_scaffold_178_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7914..8864)
DNA (951bp) protein (317aa)
Lipid kinase, YegS/Rv2252/BmrU family n=31 Tax=Staphylococcus epidermidis RepID=J0EDZ2_STAEP
Putative lipid kinase {ECO:0000313|EMBL:EFE58524.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
lipid kinase
L2_040_010G1_scaffold_178_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9089..10516)
DNA (1428bp) protein (476aa)
Aspartyl-tRNA(Asn) amidotransferase subunit B @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00121};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=51 Tax=Staphylococcus epidermidis RepID=GATB_STAEQ
L2_040_010G1_scaffold_178_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10529..11986)
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=32 Tax=Staphylococcus epidermidis RepID=C5Q6F3_STAEP
L2_040_010G1_scaffold_178_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11988..12290)
DNA (303bp) protein (101aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=45 Tax=Staphylococcus epidermidis RepID=GATC_STAEQ
L2_040_010G1_scaffold_178_13

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12668..14011
DNA (1344bp) protein (448aa)
Sodium/proline symporter n=2 Tax=Staphylococcus epidermidis RepID=J0NT81_STAEP
Sodium/proline symporter {ECO:0000313|EMBL:ETJ21442.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putP; sodium/proline symporter
Displaying 13 items

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