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L2_040_010G1_scaffold_180

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_010G1_scaffold_180_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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476..1207
DNA (732bp) protein (244aa)
Glyoxalase family protein n=1 Tax=Staphylococcus epidermidis NIH051475 RepID=J1E5E3_STAEP
Predicted ring-cleavage extradiol dioxygenase
Glyoxalase family protein {ECO:0000313|EMBL:EFE59512.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_180_2

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1212..1682
DNA (471bp) protein (157aa)
Secretory antigen SsaA n=26 Tax=Staphylococcus epidermidis RepID=Q8CPK1_STAES
secretory antigen SsaA
CHAP protein {ECO:0000313|EMBL:ETJ17519.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_180_3

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1723..2256
DNA (534bp) protein (178aa)
Lipoprotein signal peptidase n=14 Tax=Staphylococcus epidermidis RepID=F3SW30_STAEP
lspA; lipoprotein signal peptidase
Lipoprotein signal peptidase {ECO:0000313|EMBL:ETJ17518.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_180_4

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2259..3176
DNA (918bp) protein (306aa)
Pseudouridine synthase n=48 Tax=Staphylococcus epidermidis RepID=Q8CSW9_STAES
hypothetical protein
Pseudouridine synthase {ECO:0000313|EMBL:ETJ17517.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_180_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3479..4006
DNA (528bp) protein (176aa)
Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=45 Tax=Staphylococcus epidermidis RepID=PYRR_STAES
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_180_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4254..5546
DNA (1293bp) protein (431aa)
Uracil permease n=50 Tax=Staphylococcus epidermidis RepID=Q8CPJ8_STAES
Uracil permease
Putative permease {ECO:0000313|EMBL:EFE59507.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_180_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5572..6453
DNA (882bp) protein (294aa)
Aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000255|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000255|HAMAP-Rule:MF_00001}; Short=ATCase {ECO:0000255|HAMAP-Rule:MF_00001};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Aspartate carbamoyltransferase n=66 Tax=Staphylococcus epidermidis RepID=PYRB_STAES
L2_040_010G1_scaffold_180_8

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6471..7748
DNA (1278bp) protein (426aa)
Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=48 Tax=Staphylococcus epidermidis RepID=C5Q8I8_STAEP
Dihydroorotase {ECO:0000313|EMBL:ETJ17513.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_010G1_scaffold_180_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7749..8849
DNA (1101bp) protein (367aa)
Carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000255|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000255|HAMAP-Rule:MF_01209}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Carbamoyl-phosphate synthase small chain n=9 Tax=Staphylococcus epidermidis RepID=C5Q8I9_STAEP
L2_040_010G1_scaffold_180_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8842..12015
DNA (3174bp) protein (1058aa)
carB; carbamoyl-phosphate synthase large chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Carbamoyl-phosphate synthase large chain n=13 Tax=Staphylococcus epidermidis RepID=C5Q8J0_STAEP
L2_040_010G1_scaffold_180_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12044..12742
DNA (699bp) protein (233aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Orotidine 5'-phosphate decarboxylase n=3 Tax=Staphylococcus epidermidis RepID=D4FJQ1_STAEP
orotidine 5'-phosphate decarboxylase
L2_040_010G1_scaffold_180_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12743..13354
DNA (612bp) protein (204aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Orotate phosphoribosyltransferase n=45 Tax=Staphylococcus epidermidis RepID=PYRE_STAES
L2_040_010G1_scaffold_180_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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13380..13586
DNA (207bp) protein (69aa)
Uncharacterized protein n=47 Tax=Staphylococcus epidermidis RepID=Q8CSW6_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59500.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_040_010G1_scaffold_180_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14124..14222
DNA (99bp) protein (33aa)
Uncharacterized protein n=15 Tax=Staphylococcus epidermidis RepID=Q5HPY3_STAEQ
hypothetical protein
3-demethylubiquinone-9 3-methyltransferase domain protein {ECO:0000313|EMBL:EES36376.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Displaying 14 items

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