ggKbase home page

L2_040_071G1_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 531 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_1_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
Transposase, IS605 OrfB family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGH0_CLOPF
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDT26958.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
IS1136 transposase
L2_040_071G1_scaffold_1_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

831..1451
DNA (621bp) protein (207aa)
CBS domain protein n=2 Tax=Clostridium perfringens RepID=B1RGH1_CLOPF
CBS domain protein {ECO:0000313|EMBL:EDT27004.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_040_071G1_scaffold_1_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2051..4228
DNA (2178bp) protein (726aa)
2`,3`-cyclic-nucleotide 2`-phosphodiesterase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIF9_CLOPE
2`,3`-cyclic-nucleotide 2`-phosphodiesterase {ECO:0000313|EMBL:BAB81868.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
cpdC; 2`,3`-cyclic-nucleotide 2`-phosphodiesterase
L2_040_071G1_scaffold_1_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4368..4550
DNA (183bp) protein (61aa)
Small, acid-soluble spore protein 1 n=11 Tax=Clostridium perfringens RepID=SAS0_CLOPE
small acid-soluble protein Ssp1
Small, acid-soluble spore protein 1 {ECO:0000313|EMBL:EIA16363.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_1_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4831..5970
DNA (1140bp) protein (380aa)
Ser/Thr protein phosphatase family protein n=2 Tax=Clostridium perfringens RepID=B1BKD5_CLOPF
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDS79724.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Ser/Thr protein phosphatase
L2_040_071G1_scaffold_1_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5960..8728
DNA (2769bp) protein (923aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27718.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_040_071G1_scaffold_1_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8955..9851
DNA (897bp) protein (299aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY2_CLOPF
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EDT27811.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter substrate-binding protein
L2_040_071G1_scaffold_1_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10022..11551
DNA (1530bp) protein (510aa)
PTS system, glucose-specific IIBC component {ECO:0000313|EMBL:EDT27685.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT27685.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ptsG; PTS system, glucose-specific IIBC component (EC:2.7.1.69)
PTS system, glucose-specific IIBC component n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY3_CLOPF
L2_040_071G1_scaffold_1_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11855..13642
DNA (1788bp) protein (596aa)
MutS-related protein n=2 Tax=Clostridium perfringens RepID=Q8XIG4_CLOPE
MutS domain protein {ECO:0000313|EMBL:EDT27774.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
MutS domain-containing protein
L2_040_071G1_scaffold_1_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13758..15569
DNA (1812bp) protein (604aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNF7_CLOP1
Uncharacterized protein {ECO:0000313|EMBL:BAB81861.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein
L2_040_071G1_scaffold_1_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15824..16732
DNA (909bp) protein (303aa)
Exonuclease family protein n=10 Tax=Clostridium perfringens RepID=H7CYH8_CLOPF
exonuclease
Exonuclease family protein {ECO:0000313|EMBL:EDT15540.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_1_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16812..17222
DNA (411bp) protein (137aa)
CBS domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CYH7_CLOPF
CBS domain-containing protein
CBS domain-containing protein {ECO:0000313|EMBL:EIA16355.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_1_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17389..18153
DNA (765bp) protein (255aa)
UPF0246 protein AC5_2496 n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDY8_CLOPF
UPF0246 protein AC5_2496 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_040_071G1_scaffold_1_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18258..18461
DNA (204bp) protein (68aa)
Heavy metal binding protein n=9 Tax=Clostridium perfringens RepID=Q0TNG1_CLOP1
heavy metal binding protein
Heavy metal binding protein {ECO:0000313|EMBL:EDT15561.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_1_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18607..19743
DNA (1137bp) protein (379aa)
Ribosomal protein S1 family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDZ0_CLOPF
Ribosomal protein S1 family {ECO:0000313|EMBL:EDT27684.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
rpsA; 30S ribosomal protein S1
L2_040_071G1_scaffold_1_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19985..21409)
DNA (1425bp) protein (475aa)
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Pyruvate kinase n=3 Tax=Clostridium perfringens RepID=Q0TNG3_CLOP1
L2_040_071G1_scaffold_1_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21542..22993
DNA (1452bp) protein (484aa)
pepD; aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNG4_CLOP1
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:BAB81854.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_071G1_scaffold_1_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23307..24125
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R3M7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25225.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_1_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24387..25190
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R3M6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25171.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_1_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25416..25994
DNA (579bp) protein (193aa)
Maf-like protein CPF_2400 n=3 Tax=Clostridium perfringens RepID=Y2400_CLOP1
maf; Maf-like protein
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_1_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26041..26757
DNA (717bp) protein (239aa)
UPF0758 protein CPF_2399 n=2 Tax=Clostridium perfringens RepID=Y2399_CLOP1
radC; DNA repair protein RadC
DNA repair protein, RadC family {ECO:0000313|EMBL:EDT25400.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_1_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26744..27772
DNA (1029bp) protein (343aa)
Rod shape-determining protein MreB n=10 Tax=Clostridium perfringens RepID=H7CYG7_CLOPF
mreB; rod shape-determining protein MreB
Rod shape-determining protein {ECO:0000313|EMBL:BAB81849.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_071G1_scaffold_1_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27776..28627
DNA (852bp) protein (284aa)
Cell shape-determining protein MreC n=8 Tax=Clostridium perfringens RepID=Q0TNH0_CLOP1
mreC; rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_1_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28643..29140
DNA (498bp) protein (166aa)
Rod shape-determining protein MreD n=7 Tax=Clostridium perfringens RepID=H7CYG5_CLOPF
mreD; rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:EDT27794.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_040_071G1_scaffold_1_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29149..32220
DNA (3072bp) protein (1024aa)
Putative penicillin-binding protein n=2 Tax=Clostridium perfringens RepID=Q0TNH2_CLOP1
Putative penicillin-binding protein {ECO:0000313|EMBL:EDT25392.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
penicillin-binding protein
L2_040_071G1_scaffold_1_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32467..33102
DNA (636bp) protein (212aa)
Probable septum site-determining protein MinC n=11 Tax=Clostridium perfringens RepID=MINC_CLOP1
minC; septum formation inhibitor
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_1_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33131..33928
DNA (798bp) protein (266aa)
Site-determining protein n=11 Tax=Clostridium perfringens RepID=H7CYG2_CLOPF
minD; septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_071G1_scaffold_1_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33939..34211
DNA (273bp) protein (91aa)
Cell division topological specificity factor n=10 Tax=Clostridium perfringens RepID=MINE_CLOP1
minE; cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_1_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34359..35483
DNA (1125bp) protein (375aa)
Cell cycle protein FtsW n=7 Tax=Clostridium perfringens RepID=H7CYG0_CLOPF
cell cycle protein FtsW
Rod shape-determining protein RodA {ECO:0000313|EMBL:EDT15553.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_1_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35636..36496
DNA (861bp) protein (287aa)
M23 peptidase domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CYF9_CLOPF
M23 peptidase domain-containing protein {ECO:0000313|EMBL:EIA16337.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
M23 peptidase domain-containing protein
Displaying items 1-30 of 531 in total

View Taxonomy