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L2_040_071G1_scaffold_27

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Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_27_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(566..1222)
DNA (657bp) protein (219aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CRZ5_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT27320.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_040_071G1_scaffold_27_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1908..3107
DNA (1200bp) protein (400aa)
Peptidase, M23/M37 family n=2 Tax=Clostridium perfringens RepID=Q0TUN5_CLOP1
M24/M37 family peptidase
Peptidase, M23/M37 family {ECO:0000313|EMBL:EDS79649.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_040_071G1_scaffold_27_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3330..4193
DNA (864bp) protein (288aa)
5'-nucleotidase, lipoprotein e(P4) family n=3 Tax=Clostridium perfringens RepID=Q0TUN6_CLOP1
5'-nucleotidase
5'-nucleotidase, lipoprotein e(P4) family {ECO:0000313|EMBL:EDT23869.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_27_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4397..4594)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SWH8_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15497.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_27_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5150..6007)
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Energy-coupling factor transporter ATP-binding protein EcfA3 n=4 Tax=Clostridium perfringens RepID=ECFA3_CLOP1
cbiO; cobalt transporter ATP-binding subunit
L2_040_071G1_scaffold_27_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6022..6792)
DNA (771bp) protein (257aa)
Cobalt ABC transporter, permease protein CbiQ n=3 Tax=Clostridium perfringens RepID=Q0TUN9_CLOP1
cbiQ; cobalt ABC transporter permease CbiQ
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:EDT27283.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_040_071G1_scaffold_27_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6776..7087)
DNA (312bp) protein (104aa)
Cobalt transport protein CbiN n=10 Tax=Clostridium perfringens RepID=CBIN_CLOPE
cbiN; cobalt transport protein CbiN
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_27_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7087..7830)
DNA (744bp) protein (248aa)
Cobalt transport protein CbiM n=8 Tax=Clostridium perfringens RepID=H7CRZ0_CLOPF
cbiM; cobalt transport protein CbiM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_071G1_scaffold_27_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8710..13596)
DNA (4887bp) protein (1629aa)
Hyaluronidase {ECO:0000313|EMBL:EDT23880.1}; EC=3.2.1.35 {ECO:0000313|EMBL:EDT23880.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Hyaluronidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7C6_CLOPF
nagH; hyaluronidase
L2_040_071G1_scaffold_27_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13859..14248
DNA (390bp) protein (130aa)
Uncharacterized protein CPE0190 n=3 Tax=Clostridium perfringens RepID=Y190_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18628.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_27_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14435..15274)
DNA (840bp) protein (280aa)
Uncharacterized HTH-type transcriptional regulator CPE0189 n=9 Tax=Clostridium perfringens RepID=Y189_CLOPE
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15444.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_27_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15465..16352)
DNA (888bp) protein (296aa)
ROK family protein n=2 Tax=Clostridium perfringens RepID=Q0TUP5_CLOP1
ROK family protein
ROK family protein {ECO:0000313|EMBL:EDT23909.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_27_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16508..16960)
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BS10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15485.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_27_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17071..18588)
DNA (1518bp) protein (506aa)
Sodium/solute symporter family protein n=4 Tax=Clostridium perfringens RepID=H7CRY4_CLOPF
sodium/solute symporter family protein
Sodium/solute symporter family protein {ECO:0000313|EMBL:EIA18624.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_27_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18692..19558)
DNA (867bp) protein (289aa)
nanA; N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase; Short=NAL;; Short=Neu5Ac lyase;; EC=4.1.3.3;; N-acetylneuraminate pyruvate-lyase; N-acetylneuraminic acid aldolase; Sialate lyase; Sialic acid aldolase; Sialic acid lyase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N-acetylneuraminate lyase n=7 Tax=Clostridium perfringens RepID=NANA_CLOP1
L2_040_071G1_scaffold_27_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19595..20260)
DNA (666bp) protein (222aa)
nanE; N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Clostridium perfringens RepID=NANE_CLOP1
L2_040_071G1_scaffold_27_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20545..21213)
DNA (669bp) protein (223aa)
Nitroreductase family protein n=2 Tax=Clostridium perfringens RepID=Q0TUQ0_CLOP1
nitroreductase
Nitroreductase family protein {ECO:0000313|EMBL:EDT23875.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_27_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21482..22549
DNA (1068bp) protein (356aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFA9_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT27277.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter ATP-binding protein
L2_040_071G1_scaffold_27_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22552..23370
DNA (819bp) protein (273aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKL7_CLOPF
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EDS79673.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ABC transporter permease
L2_040_071G1_scaffold_27_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23375..24166
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V181_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT72435.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_040_071G1_scaffold_27_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24550..25524)
DNA (975bp) protein (325aa)
Putative esterase n=1 Tax=Clostridium perfringens F262 RepID=H7CRX7_CLOPF
Putative esterase {ECO:0000313|EMBL:EIA18617.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
esterase
L2_040_071G1_scaffold_27_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25873..26328)
DNA (456bp) protein (152aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
S-ribosylhomocysteine lyase n=6 Tax=Clostridium perfringens RepID=LUXS_CLOPE
luxS; S-ribosylhomocysteinase
L2_040_071G1_scaffold_27_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26413..27321)
DNA (909bp) protein (303aa)
Cysteine synthase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CW24_CLOPF
cysteine synthase family protein
Cysteine synthase family protein {ECO:0000313|EMBL:ABG85476.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_040_071G1_scaffold_27_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27308..28462)
DNA (1155bp) protein (385aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:EDT15473.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EDT15473.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cystathionine beta-lyase n=2 Tax=Clostridium perfringens RepID=B1BS21_CLOPF
metB; cystathionine beta-lyase
L2_040_071G1_scaffold_27_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28525..29148)
DNA (624bp) protein (208aa)
UbiE/COQ5 family methyltransferase n=6 Tax=Clostridium perfringens RepID=H7CRX3_CLOPF
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EDT23890.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UbiE/COQ5 family methlytransferase
L2_040_071G1_scaffold_27_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29891..30349
DNA (459bp) protein (153aa)
Large-conductance mechanosensitive channel n=2 Tax=Clostridium perfringens RepID=B1BS23_CLOPF
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
mscL; large-conductance mechanosensitive channel
L2_040_071G1_scaffold_27_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30497..33811)
DNA (3315bp) protein (1105aa)
Microbial collagenase {ECO:0000313|EMBL:EDT15459.1}; EC=3.4.24.3 {ECO:0000313|EMBL:EDT15459.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Microbial collagenase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS24_CLOPF
colA; collagenase
L2_040_071G1_scaffold_27_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34354..34809)
DNA (456bp) protein (152aa)
Arginine regulator n=6 Tax=Clostridium perfringens RepID=ARGR1_CLOPE
argR; arginine repressor ArgR
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_040_071G1_scaffold_27_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34882..35826)
DNA (945bp) protein (315aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=5 Tax=Clostridium perfringens RepID=H7CRW9_CLOPF
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_27_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35887..37323)
DNA (1437bp) protein (479aa)
Arginine/ornithine antiporter n=5 Tax=Clostridium perfringens RepID=H7CRW8_CLOPF
Arginine/ornithine antiporter {ECO:0000313|EMBL:EDT15525.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
arcD; arginine/ornithine antiporter
Displaying items 1-30 of 104 in total

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