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L2_040_071G1_scaffold_34

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_34_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134..2143)
DNA (2010bp) protein (670aa)
UPI0003D5F66A related cluster n=1 Tax=unknown RepID=UPI0003D5F66A
Uncharacterized protein {ECO:0000313|EMBL:ETI88244.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
putative methyl-accepting chemotaxis protein
L2_040_071G1_scaffold_34_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2381..4570)
DNA (2190bp) protein (730aa)
agaR1; alpha-galactosidase 1 (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AS39_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35564.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_071G1_scaffold_34_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4795..6549)
DNA (1755bp) protein (585aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGS2_CLOBU
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ86065.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_071G1_scaffold_34_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6830..7978)
DNA (1149bp) protein (383aa)
Cyclically-permuted mutarotase family protein n=2 Tax=Clostridium butyricum RepID=M8KH09_CLOBU
Cyclically-permuted mutarotase {ECO:0000313|EMBL:ENZ35562.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
lipoprotein
L2_040_071G1_scaffold_34_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8096..9037)
DNA (942bp) protein (314aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6Q9_CLOBU
Glucokinase {ECO:0000313|EMBL:KHD16383.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_040_071G1_scaffold_34_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9041..9739)
DNA (699bp) protein (233aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNI3_CLOBU
L2_040_071G1_scaffold_34_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9864..10817)
DNA (954bp) protein (318aa)
cah; cephalosporin C deacetylase Cah (EC:3.1.1.41 3.1.1.72)
Xylan esterase 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JM85_CLOBU
Acetyl xylan esterase {ECO:0000313|EMBL:KHD16381.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_040_071G1_scaffold_34_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10819..11784)
DNA (966bp) protein (322aa)
Xylan esterase 1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8S4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35558.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Acetyl xylan esterase
L2_040_071G1_scaffold_34_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11796..13415)
DNA (1620bp) protein (540aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8KH03_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89906.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
pyridine nucleotide-disulfide oxidoreductase
L2_040_071G1_scaffold_34_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13405..14334)
DNA (930bp) protein (310aa)
N-acetylneuraminate lyase 2 n=2 Tax=Clostridium butyricum RepID=B1QZ42_CLOBU
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:EEP52788.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
L2_040_071G1_scaffold_34_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14327..15367)
DNA (1041bp) protein (347aa)
Oligopeptide transport ATP-binding protein AppF n=4 Tax=Clostridium butyricum RepID=B1QZ41_CLOBU
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJZ86073.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L2_040_071G1_scaffold_34_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15354..16364)
DNA (1011bp) protein (337aa)
Dipeptide transport ATP-binding protein DppD n=2 Tax=Clostridium butyricum RepID=M8JM79_CLOBU
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KJZ86075.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L2_040_071G1_scaffold_34_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16376..17305)
DNA (930bp) protein (310aa)
Oligopeptide transport system permease protein AppC n=4 Tax=Clostridium butyricum RepID=B1QZ39_CLOBU
Peptide/nickel ABC transporter permease {ECO:0000313|EMBL:ENZ35553.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L2_040_071G1_scaffold_34_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17317..18276)
DNA (960bp) protein (320aa)
Oligopeptide transport system permease protein AppB n=4 Tax=Clostridium butyricum RepID=B1QZ38_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35552.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L2_040_071G1_scaffold_34_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18351..19991)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6P9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35551.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
extracellular solute-binding protein, family 5
L2_040_071G1_scaffold_34_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20509..21345)
DNA (837bp) protein (279aa)
Phosphosugar-binding transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=M8JNH2_CLOBU
Sialic acid utilization regulator, RpiR family {ECO:0000313|EMBL:KJZ86033.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RpiR family transcriptional regulator
L2_040_071G1_scaffold_34_17
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21520..22389)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JFE8_CLOBU
Resolvase domain protein {ECO:0000313|EMBL:CDX04910.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
site-specific recombinase, DNA invertase Pin
L2_040_071G1_scaffold_34_18
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22430..23170)
DNA (741bp) protein (247aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAJ5_9CLOT
Resolvase domain protein {ECO:0000313|EMBL:CDX04910.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
recombinase
L2_040_071G1_scaffold_34_19
unknown

Not on your lists

comp(23190..23384)
DNA (195bp) protein (65aa)

This feature has no annotations

L2_040_071G1_scaffold_34_20
unknown

Not on your lists

comp(23493..24083)
DNA (591bp) protein (197aa)

This feature has no annotations

L2_040_071G1_scaffold_34_21
unknown

Not on your lists

comp(24070..24381)
DNA (312bp) protein (104aa)

This feature has no annotations

L2_040_071G1_scaffold_34_22
unknown

Not on your lists

comp(24462..24986)
DNA (525bp) protein (175aa)

This feature has no annotations

L2_040_071G1_scaffold_34_23
unknown

Not on your lists

comp(25097..25297)
DNA (201bp) protein (67aa)

This feature has no annotations

L2_040_071G1_scaffold_34_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25354..25557)
DNA (204bp) protein (68aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TH66_9CLOT
Site-specific recombinase XerD {ECO:0000313|EMBL:EKQ50460.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
integrase
L2_040_071G1_scaffold_34_25
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25677..26165)
DNA (489bp) protein (163aa)
Integrase family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZK8_9CLOT
Integrase family protein {ECO:0000313|EMBL:EHI97939.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
phage integrase family protein
L2_040_071G1_scaffold_34_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26698..27021)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AJG98560.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_040_071G1_scaffold_34_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27582..28046)
DNA (465bp) protein (155aa)
GyrI-like small molecule binding domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3D4J1_CLODI
GyrI-like small molecule binding domain protein {ECO:0000313|EMBL:EQF22388.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
putative transcriptional regulator
L2_040_071G1_scaffold_34_28
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28069..28500)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KT85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49431.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L2_040_071G1_scaffold_34_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28539..29450)
DNA (912bp) protein (304aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQR4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03253.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA-binding domain-containing protein
L2_040_071G1_scaffold_34_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30207..30386)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99699.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Displaying items 1-30 of 107 in total

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