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L2_040_071G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_42_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1341)
DNA (1341bp) protein (447aa)
Aldehyde-alcohol dehydrogenase n=2 Tax=Escherichia coli RepID=L4LEM2_ECOLX
adhE; bifunctional acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L2_040_071G1_scaffold_42_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1818..2465
DNA (648bp) protein (216aa)
UPF0056 membrane protein YhcE n=511 Tax=Enterobacteriaceae RepID=YCHE_ECOLI
ychE; inner membrane protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0522.;"
L2_040_071G1_scaffold_42_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2492..2647
DNA (156bp) protein (52aa)
Uncharacterized protein n=402 Tax=Enterobacteriaceae RepID=J7R0A6_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EII32303.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
L2_040_071G1_scaffold_42_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2623..2784)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Escherichia coli (strain SMS-3-5 / SECEC) RepID=B1LH58_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHW20166.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L2_040_071G1_scaffold_42_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3158..4834
DNA (1677bp) protein (559aa)
Peptide/nickel transport system substrate-binding protein n=1 Tax=Escherichia coli B185 RepID=D6I756_ECOLX
Periplasmic oligopeptide-binding protein {ECO:0000313|EMBL:ESD41536.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
extracellular solute-binding protein
L2_040_071G1_scaffold_42_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4920..5840
DNA (921bp) protein (307aa)
Oligopeptide transport system permease protein OppB n=1302 Tax=Enterobacteriaceae RepID=OPPB_ECO57
Oligopeptide transporter ABC transporter permease component
Oligopeptide transport system permease oppB {ECO:0000313|EMBL:EQN28504.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_040_071G1_scaffold_42_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5855..6763
DNA (909bp) protein (303aa)
Oligopeptide transport system permease protein oppC n=400 Tax=Enterobacteriaceae RepID=E2QLK4_ECOLX
oppC; oligopeptide transport system permease oppC
Oligopeptide transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CAR07596.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L2_040_071G1_scaffold_42_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6775..7788
DNA (1014bp) protein (338aa)
Oligopeptide ABC transport system ATP-binding protein OppD n=483 Tax=Enterobacteriaceae RepID=C3TCJ7_ECOLX
oppD; oligopeptide ABC transporter ATP-binding protein
Oligopeptide transport ATP-binding protein oppD {ECO:0000313|EMBL:EFU96535.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
L2_040_071G1_scaffold_42_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7785..8789
DNA (1005bp) protein (335aa)
Homolog of Salmonella ATP-binding protein of oligopeptide ABC transport system n=1226 Tax=Enterobacteriaceae RepID=C3TCJ2_ECOLX
oppF; oligopeptide ABC transporter
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:EQQ09060.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L2_040_071G1_scaffold_42_10
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8842..9171)
DNA (330bp) protein (110aa)
PF04269 family protein n=1 Tax=Escherichia coli 3003 RepID=I2YWN2_ECOLX
yciU; putative cytoplasmic protein YciU
UPF0263 protein YciU {ECO:0000256|HAMAP-Rule:MF_00680}; TaxID=754093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 1617.;"
L2_040_071G1_scaffold_42_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9206..10666)
DNA (1461bp) protein (487aa)
Cardiolipin synthase A {ECO:0000256|HAMAP-Rule:MF_00190, ECO:0000256|SAAS:SAAS00194234}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_00190};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_00190, ECO:0000256|SAAS:SAAS00017006};; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H11 str. 2010C-3214.;"
Cardiolipin synthase n=1087 Tax=Enterobacteriaceae RepID=CLS_ECO24
cls; cardiolipin synthetase
L2_040_071G1_scaffold_42_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11037..12290)
DNA (1254bp) protein (418aa)
Potassium channel protein n=288 Tax=Enterobacteriaceae RepID=C3TCH7_ECOLX
kch; voltage-gated potassium channel
Voltage-gated potassium channel {ECO:0000313|EMBL:EOU70930.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L2_040_071G1_scaffold_42_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12590..12886)
DNA (297bp) protein (99aa)
Protein YciI n=1172 Tax=Enterobacteriaceae RepID=YCII_ECOL6
YciL domain-containing protein
Protein YciI {ECO:0000313|EMBL:AKA90254.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli VR50.;"
L2_040_071G1_scaffold_42_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13095..13829
DNA (735bp) protein (245aa)
TonB family protein n=16 Tax=Escherichia coli RepID=B1ITK3_ECOLC
transporter TonB
Protein tonB {ECO:0000313|EMBL:ELC09649.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_071G1_scaffold_42_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13869..14267)
DNA (399bp) protein (133aa)
Acyl-CoA thioester hydrolase YciA n=1147 Tax=Enterobacteriaceae RepID=YCIA_ECOL6
acyl-CoA thioester hydrolase
Acyl-CoA esterase {ECO:0000313|EMBL:AFH10975.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L2_040_071G1_scaffold_42_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14372..14911)
DNA (540bp) protein (180aa)
Probable intracellular septation protein A n=934 Tax=Enterobacteriaceae RepID=YCIB_ECO24
intracellular septation protein A
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L2_040_071G1_scaffold_42_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14941..15684)
DNA (744bp) protein (248aa)
UPF0259 membrane protein YciC n=365 Tax=Enterobacteriaceae RepID=YCIC_ECO55
hypothetical protein
UPF0259 membrane protein YciC {ECO:0000256|HAMAP-Rule:MF_01067}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_040_071G1_scaffold_42_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16041..16679
DNA (639bp) protein (213aa)
Outer membrane protein W n=376 Tax=Enterobacteriaceae RepID=OMPW_ECOLI
ompW; outer membrane protein W
Outer membrane protein W {ECO:0000313|EMBL:EID65648.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L2_040_071G1_scaffold_42_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16739..17245)
DNA (507bp) protein (169aa)
Protein YciE n=208 Tax=Escherichia RepID=YCIE_ECOLI
hypothetical protein
Protein yciE {ECO:0000313|EMBL:ENA33679.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
L2_040_071G1_scaffold_42_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17291..17791)
DNA (501bp) protein (167aa)
YciF protein n=12 Tax=Escherichia coli RepID=B3XBY2_ECOLX
yciF; hypothetical protein
Protein yciF {ECO:0000313|EMBL:KDU30577.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L2_040_071G1_scaffold_42_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17877..18056)
DNA (180bp) protein (60aa)
Uncharacterized protein YciG n=977 Tax=Enterobacteriaceae RepID=YCIG_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENB14105.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
L2_040_071G1_scaffold_42_22
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18437..19243)
DNA (807bp) protein (269aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
Tryptophan synthase alpha chain n=258 Tax=Enterobacteriaceae RepID=TRPA_ECOBW
tryptophan synthase alpha chain
L2_040_071G1_scaffold_42_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19243..20436)
DNA (1194bp) protein (398aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
Tryptophan synthase beta chain n=536 Tax=Enterobacteriaceae RepID=TRPB_ECO24
tryptophan synthase beta chain
L2_040_071G1_scaffold_42_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20448..21806)
DNA (1359bp) protein (453aa)
bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC:4.1.1.48 5.3.1.24)
Tryptophan biosynthesis protein trpCF {ECO:0000313|EMBL:EDU63233.1}; EC=4.1.1.48 {ECO:0000313|EMBL:EDU63233.1};; EC=5.3.1.24 {ECO:0000313|EMBL:EDU63233.1};; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
Tryptophan biosynthesis protein trpCF n=18 Tax=Escherichia coli RepID=A7ZZJ8_ECOHS
L2_040_071G1_scaffold_42_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21810..23405)
DNA (1596bp) protein (532aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
trpD; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase (EC:2.4.2.18 4.1.3.27)
Anthranilate phosphoribosyltransferase n=29 Tax=Escherichia coli RepID=N4JZT5_ECOLX
L2_040_071G1_scaffold_42_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23405..24967)
DNA (1563bp) protein (521aa)
Anthranilate synthase component 1 {ECO:0000256|PIRNR:PIRNR001373}; EC=4.1.3.27 {ECO:0000256|PIRNR:PIRNR001373};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Anthranilate synthase component 1 n=11 Tax=Escherichia coli RepID=A7ZZK0_ECOHS
anthranilate synthase component I
L2_040_071G1_scaffold_42_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25241..26122
DNA (882bp) protein (294aa)
Protein TrpH n=407 Tax=Escherichia RepID=TRPH_ECOLI
PHP domain-containing protein
Putative metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:AIF60346.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L2_040_071G1_scaffold_42_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26119..26739
DNA (621bp) protein (207aa)
Uncharacterized protein YciO n=1300 Tax=Enterobacteriaceae RepID=YCIO_ECOL6
yciO; hypothetical protein
YciO family {ECO:0000313|EMBL:CDL46421.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L2_040_071G1_scaffold_42_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26767..28662
DNA (1896bp) protein (632aa)
Inner membrane protein n=1 Tax=Escherichia coli KTE10 RepID=L2V483_ECOLX
Inner membrane protein {ECO:0000313|EMBL:ELC09664.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_071G1_scaffold_42_30
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28873..29748
DNA (876bp) protein (292aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 5216-82.;"
Ribosomal large subunit pseudouridine synthase B n=256 Tax=Enterobacteriaceae RepID=RLUB_ECOLI
Ribosomal large subunit pseudouridine synthase B
Displaying items 1-30 of 117 in total

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