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L2_040_071G1_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_43_1
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(143..1405)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QJZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFM38939.1}; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eubacterium] yurii subsp. margaretiae ATCC 43715.;"
hypothetical protein
L2_040_071G1_scaffold_43_2
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2151..2495)
DNA (345bp) protein (115aa)
DNA integration/recombination protein n=1 Tax=Clostridium botulinum Af84 RepID=S8DA89_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KJZ89641.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
DNA integration/recombination protein
L2_040_071G1_scaffold_43_3

Not on your lists

comp(2604..2816)
DNA (213bp) protein (71aa)
DNA integration/recombination protein n=1 Tax=Clostridium botulinum Af84 RepID=S8DA89_CLOBO
Putative integrase/recombinase {ECO:0000313|EMBL:ETJ19740.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
integrase/recombinase
L2_040_071G1_scaffold_43_4
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3021..3155)
DNA (135bp) protein (45aa)
DNA integration/recombination protein n=1 Tax=Clostridium botulinum Af84 RepID=S8DA89_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KJZ89650.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L2_040_071G1_scaffold_43_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3278..4171)
DNA (894bp) protein (298aa)
Sporulation transcription factor Spo0A n=2 Tax=Clostridium butyricum RepID=B1QU80_CLOBU
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
spo0A; stage 0 sporulation protein A
L2_040_071G1_scaffold_43_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4570..5760)
DNA (1191bp) protein (397aa)
SpoIVB peptidase n=2 Tax=Clostridium butyricum RepID=M8JLP2_CLOBU
Stage IV sporulation protein B {ECO:0000313|EMBL:ENZ34234.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidase S55, sporulation stage IV, protein B
L2_040_071G1_scaffold_43_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6074..7762)
DNA (1689bp) protein (563aa)
DNA repair protein RecN n=3 Tax=Clostridium butyricum RepID=B1QU77_CLOBU
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
recN; DNA repair protein RecN
L2_040_071G1_scaffold_43_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7781..8233)
DNA (453bp) protein (151aa)
Arginine repressor n=4 Tax=Clostridium butyricum RepID=B1QU76_CLOBU
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
argR; arginine repressor
L2_040_071G1_scaffold_43_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8230..9156)
DNA (927bp) protein (309aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase PpnK (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Clostridium butyricum RepID=M8KF77_CLOBU
L2_040_071G1_scaffold_43_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9174..9986)
DNA (813bp) protein (271aa)
yqxC; putative rRNA methyltransferase YqxC (EC:2.1.1.-)
Hemolysin TlyA family protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACZ9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88444.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_040_071G1_scaffold_43_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9999..11855)
DNA (1857bp) protein (619aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dxs2; 1-deoxy-D-xylulose-5-phosphate synthase Dxs (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLN7_CLOBU
L2_040_071G1_scaffold_43_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11872..12750)
DNA (879bp) protein (293aa)
ispA; farnesyl diphosphate synthase IspA (EC:2.5.1.10)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3M9_CLOBU
Geranyltranstransferase {ECO:0000313|EMBL:ETI87779.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_040_071G1_scaffold_43_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12728..12952)
DNA (225bp) protein (75aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=4 Tax=Clostridium butyricum RepID=B1QW15_CLOBU
L2_040_071G1_scaffold_43_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12964..14163)
DNA (1200bp) protein (400aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
xseA; exodeoxyribonuclease 7 large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=2 Tax=Clostridium butyricum RepID=R0AQA8_CLOBU
L2_040_071G1_scaffold_43_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14153..15025)
DNA (873bp) protein (291aa)
folD1; bifunctional protein FolD (EC:1.5.1.5 3.5.4.9)
UPI0003D641F0 related cluster n=1 Tax=unknown RepID=UPI0003D641F0
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_040_071G1_scaffold_43_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15447..15842)
DNA (396bp) protein (132aa)
N utilization substance protein B homolog n=4 Tax=Clostridium butyricum RepID=B1QW19_CLOBU
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NusB antitermination factor
L2_040_071G1_scaffold_43_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15965..16345)
DNA (381bp) protein (127aa)
Alkaline shock protein n=4 Tax=Clostridium butyricum RepID=B1QW20_CLOBU
Alkaline shock protein {ECO:0000313|EMBL:KJZ86429.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_071G1_scaffold_43_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16447..17004)
DNA (558bp) protein (186aa)
Stage III sporulation protein AH n=5 Tax=Clostridium butyricum RepID=B1QW21_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88432.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
SpoIIIAH-like protein
L2_040_071G1_scaffold_43_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17027..17650)
DNA (624bp) protein (208aa)
Stage III sporulation protein AG n=2 Tax=Clostridium butyricum RepID=M8KF67_CLOBU
Stage III sporulation protein AG {ECO:0000313|EMBL:KJZ86401.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
stage III sporulation protein AG
L2_040_071G1_scaffold_43_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17664..18254)
DNA (591bp) protein (197aa)
Stage III sporulation protein AF n=2 Tax=Clostridium butyricum RepID=M8JB82_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86409.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
stage III sporulation protein AF
L2_040_071G1_scaffold_43_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18260..19582)
DNA (1323bp) protein (441aa)
Stage III sporulation protein AE n=4 Tax=Clostridium butyricum RepID=B1QW24_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86373.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
spoIIIAE; stage III sporulation protein AE
L2_040_071G1_scaffold_43_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19676..20059)
DNA (384bp) protein (128aa)
Stage III sporulation protein AD n=3 Tax=Clostridium butyricum RepID=B1QW25_CLOBU
Stage III sporulation protein AD {ECO:0000313|EMBL:KJZ86427.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sporulation stage III, protein AD
L2_040_071G1_scaffold_43_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20071..20268)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=4 Tax=Clostridium butyricum RepID=B1QW26_CLOBU
Stage III sporulation protein AC {ECO:0000313|EMBL:ENZ34251.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
spoIIIAC; stage III sporulation protein AC
L2_040_071G1_scaffold_43_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20444..20962)
DNA (519bp) protein (173aa)
Stage III sporulation protein AB n=2 Tax=Clostridium butyricum RepID=M8KF62_CLOBU
Stage III sporulation protein AB {ECO:0000313|EMBL:KJZ86477.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sporulation stage III, protein AB
L2_040_071G1_scaffold_43_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20950..21876)
DNA (927bp) protein (309aa)
Stage III sporulation protein AA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JB77_CLOBU
Stage III sporulation protein AA {ECO:0000313|EMBL:EEP54779.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sporulation stage III, protein AA
L2_040_071G1_scaffold_43_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22056..22418)
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QW29_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86455.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_071G1_scaffold_43_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22592..23149)
DNA (558bp) protein (186aa)
Elongation factor P n=4 Tax=Clostridium butyricum RepID=B1QW30_CLOBU
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
efp; elongation factor P
L2_040_071G1_scaffold_43_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23322..23681)
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QW31_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52969.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_040_071G1_scaffold_43_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23671..24090)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KF57_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86451.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_071G1_scaffold_43_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24077..24709)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IL63_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53025.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
Displaying items 1-30 of 107 in total

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