ggKbase home page

L2_040_071G1_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_93_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(476..1198)
DNA (723bp) protein (241aa)
MgtC family protein n=2 Tax=Clostridium perfringens RepID=H7CT31_CLOPF
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:EIA18325.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_93_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1486..2409)
DNA (924bp) protein (308aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glutaminase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWK0_CLOPF
glutaminase
L2_040_071G1_scaffold_93_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2713..4026)
DNA (1314bp) protein (438aa)
Voltage-gated chloride channel family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWK1_CLOPF
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EDT13911.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
voltage-gated chloride channel family protein
L2_040_071G1_scaffold_93_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4404..5063)
DNA (660bp) protein (220aa)
Isochorismatase family protein n=3 Tax=Clostridium perfringens RepID=H7CT27_CLOPF
Isochorismatase family protein {ECO:0000313|EMBL:EDT13904.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
isochorismatase
L2_040_071G1_scaffold_93_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5321..6421
DNA (1101bp) protein (367aa)
Permease n=5 Tax=Clostridium perfringens RepID=H7CT26_CLOPF
Permease {ECO:0000313|EMBL:EIA18320.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
permease
L2_040_071G1_scaffold_93_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6472..6924)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7F3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23783.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_040_071G1_scaffold_93_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7215..7961
DNA (747bp) protein (249aa)
DeoR family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CT24_CLOPF
DeoR family transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80292.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_040_071G1_scaffold_93_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7961..8881
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Tagatose-6-phosphate kinase n=5 Tax=Clostridium perfringens RepID=H7CT23_CLOPF
fruB; 1-phosphofructokinase
L2_040_071G1_scaffold_93_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8885..10777
DNA (1893bp) protein (631aa)
PTS system, fructose-specific, IIABC component {ECO:0000313|EMBL:EDT13901.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT13901.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
fruA; PTS system fructose-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system, Fru family, IIC component n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTN2_CLOPF
L2_040_071G1_scaffold_93_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11059..12057)
DNA (999bp) protein (333aa)
Phosphate transporter family protein n=9 Tax=Clostridium perfringens RepID=H7CT21_CLOPF
phosphate transporter family protein
Phosphate transporter family protein {ECO:0000313|EMBL:EIA18315.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_93_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12050..12682)
DNA (633bp) protein (211aa)
Phosphate transport regulator n=10 Tax=Clostridium perfringens RepID=H7CT20_CLOPF
hypothetical protein
Phosphate transport regulator {ECO:0000313|EMBL:EIA18314.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_93_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12968..13555)
DNA (588bp) protein (196aa)
CDP-alcohol phosphatidyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CT19_CLOPF
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:EIA18313.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_93_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13718..14830)
DNA (1113bp) protein (371aa)
Iron-sulfur cluster-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7E6_CLOPF
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDT23843.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
cysteine-rich domain-contain protein
L2_040_071G1_scaffold_93_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14820..15515)
DNA (696bp) protein (232aa)
DedA family protein n=9 Tax=Clostridium perfringens RepID=H7CT17_CLOPF
DedA family protein
DedA family protein {ECO:0000313|EMBL:ABG87425.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_040_071G1_scaffold_93_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15863..16744)
DNA (882bp) protein (294aa)
ABC transporter, permease protein n=8 Tax=Clostridium perfringens RepID=H7CT16_CLOPF
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIA18310.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_040_071G1_scaffold_93_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16746..17672)
DNA (927bp) protein (309aa)
ABC transporter permease n=6 Tax=Clostridium perfringens RepID=H7CT15_CLOPF
ABC transporter, permease protein {ECO:0000313|EMBL:EDT13923.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter permease
L2_040_071G1_scaffold_93_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17751..19136)
DNA (1386bp) protein (462aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIM6_CLOPF
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDT26196.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter
L2_040_071G1_scaffold_93_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19289..20878)
DNA (1590bp) protein (530aa)
DNA-binding response regulator, AraC family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIM7_CLOPF
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT26182.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
AraC family transcriptional regulator
L2_040_071G1_scaffold_93_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20891..22435)
DNA (1545bp) protein (515aa)
Sensor histidine kinase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIM8_CLOPF
Sensor histidine kinase {ECO:0000313|EMBL:EDT26185.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
sensor histidine kinase
L2_040_071G1_scaffold_93_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22825..25029)
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7D9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23822.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_040_071G1_scaffold_93_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25322..25570)
DNA (249bp) protein (83aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CT10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13925.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_040_071G1_scaffold_93_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25969..26376
DNA (408bp) protein (136aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CT08_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70518.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_040_071G1_scaffold_93_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26575..27036)
DNA (462bp) protein (154aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000255|HAMAP-Rule:MF_00178};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
6,7-dimethyl-8-ribityllumazine synthase n=4 Tax=Clostridium perfringens RepID=RISB_CLOPE
L2_040_071G1_scaffold_93_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27151..28350)
DNA (1200bp) protein (400aa)
ribA; riboflavin biosynthesis protein RibA (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTN8_CLOP1
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_040_071G1_scaffold_93_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28502..29155)
DNA (654bp) protein (218aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ABG85559.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ABG85559.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Riboflavin synthase, alpha subunit n=2 Tax=Clostridium perfringens RepID=Q0TTN9_CLOP1
L2_040_071G1_scaffold_93_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29177..30259)
DNA (1083bp) protein (361aa)
ribD; riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTP0_CLOP1
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_040_071G1_scaffold_93_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30827..31558)
DNA (732bp) protein (244aa)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7G2_CLOPF
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDT23829.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
N-acetylmuramoyl-L-alanine amidase
L2_040_071G1_scaffold_93_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31863..34049
DNA (2187bp) protein (729aa)
Stage V sporulation protein D n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7G1_CLOPF
Stage V sporulation protein D {ECO:0000313|EMBL:EDT23827.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
spoVD; stage V sporulation protein D
L2_040_071G1_scaffold_93_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34500..35207)
DNA (708bp) protein (236aa)
Trehalose operon repressor n=2 Tax=Clostridium perfringens RepID=Q0TTP3_CLOP1
treR; trehalose operon repressor
Trehalose operon repressor {ECO:0000313|EMBL:EDT26193.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_040_071G1_scaffold_93_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35472..37139)
DNA (1668bp) protein (556aa)
treC; alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNK0_CLOPF
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EIA18293.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 54 in total

View Taxonomy