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L2_040_071G1_scaffold_96

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_96_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

268..1089
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z220_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33710.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
AraC family transcriptional regulator
L2_040_071G1_scaffold_96_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1323..1922
DNA (600bp) protein (200aa)
30S ribosomal protein S4 n=3 Tax=Clostridium butyricum RepID=B1R2S6_CLOBU
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rpsD2; 30S ribosomal protein S4 B
L2_040_071G1_scaffold_96_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2225..2716)
DNA (492bp) protein (164aa)
mog; molybdopterin adenylyltransferase Mog (EC:2.7.7.75)
Molybdenum cofactor synthesis protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JME3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96821.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_040_071G1_scaffold_96_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2704..3138)
DNA (435bp) protein (145aa)
Mosc domain protein n=4 Tax=Clostridium butyricum RepID=B1R2S4_CLOBU
Molybdenum cofactor biosynthesis protein MoaB {ECO:0000313|EMBL:KJZ83682.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
MOSC domain-containing protein
L2_040_071G1_scaffold_96_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3223..4206)
DNA (984bp) protein (328aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
moaA; cyclic pyranopterin monophosphate synthase MoaA (EC:4.1.99.18)
Cyclic pyranopterin monophosphate synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7M4_CLOBU
L2_040_071G1_scaffold_96_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4203..4712)
DNA (510bp) protein (170aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=3 Tax=Clostridium butyricum RepID=B1R2S2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96825.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
mobB; molybdopterin-guanine dinucleotide biosynthesis protein B
L2_040_071G1_scaffold_96_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4702..5184)
DNA (483bp) protein (161aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBY0_CLOBU
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
moaC; cyclic pyranopterin monophosphate synthase accessory protein MoaC
L2_040_071G1_scaffold_96_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5213..6421)
DNA (1209bp) protein (403aa)
moeA1; molybdopterin molybdenumtransferase MoeA (EC:2.10.1.1)
UPI0003D6538F related cluster n=1 Tax=unknown RepID=UPI0003D6538F
Molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:ETI90298.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_040_071G1_scaffold_96_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6442..7470)
DNA (1029bp) protein (343aa)
Molybdopterin-binding domain protein n=5 Tax=Clostridium butyricum RepID=B1R2R9_CLOBU
Molybdopterin binding domain protein {ECO:0000313|EMBL:EEP54428.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
moeA2; molybdopterin biosynthesis protein MoeA
L2_040_071G1_scaffold_96_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7943..8515)
DNA (573bp) protein (191aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mobA; molybdenum cofactor guanylyltransferase MobA (EC:2.7.7.77)
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7L9_CLOBU
L2_040_071G1_scaffold_96_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8613..9557)
DNA (945bp) protein (315aa)
C4-dicarboxylate transporter/malic acid transport protein n=2 Tax=Clostridium butyricum RepID=B1R2R6_CLOBU
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:EEP53913.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
C4-dicarboxylate transporter/malic acid transport protein
L2_040_071G1_scaffold_96_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9704..10939)
DNA (1236bp) protein (412aa)
padH; NADH-dependent phenylglyoxylate dehydrogenase subunit epsilon (EC:1.2.1.58)
Nitrate reductase, NADH oxidase subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBX6_CLOBU
Nitrate reductase, NADH oxidase subunit {ECO:0000313|EMBL:EEP55018.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_071G1_scaffold_96_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10943..11359)
DNA (417bp) protein (139aa)
AnaeroBic dimethyl sulfoxide reductase chain b n=3 Tax=Clostridium butyricum RepID=B1R2R5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93050.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NAD(P)H-dependent nitrate reductase iron-sulfur subunit
L2_040_071G1_scaffold_96_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11373..13445)
DNA (2073bp) protein (691aa)
Assimilatory nitrate reductase large subunit {ECO:0000313|EMBL:KJZ83650.1}; EC=1.7.99.4 {ECO:0000313|EMBL:KJZ83650.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
narB; nitrate reductase NarB (EC:1.7.99.4)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALU4_CLOBU
L2_040_071G1_scaffold_96_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13738..14715)
DNA (978bp) protein (326aa)
Anaerobic sulfite reductase subunit C {ECO:0000313|EMBL:KJZ83678.1}; EC=1.8.1.- {ECO:0000313|EMBL:KJZ83678.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
asrC; anaerobic sulfite reductase subunit C (EC:1.8.1.-)
Sulfite reductase, subunit C n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z230_CLOBU
L2_040_071G1_scaffold_96_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14732..15523)
DNA (792bp) protein (264aa)
Sulfite reductase, subunit B n=2 Tax=Clostridium butyricum RepID=B1R2R2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93041.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
asrB; anaerobic sulfite reductase subunit B
L2_040_071G1_scaffold_96_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15524..16531)
DNA (1008bp) protein (336aa)
Sulfite reductase, subunit A n=4 Tax=Clostridium butyricum RepID=B1R2R1_CLOBU
Sulfite reductase, subunit A {ECO:0000313|EMBL:ENZ33727.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
asrA; anaerobic sulfite reductase subunit A
L2_040_071G1_scaffold_96_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16685..17374)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABH6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33728.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, Crp/Fnr family
L2_040_071G1_scaffold_96_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17665..18594
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALU8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33729.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_040_071G1_scaffold_96_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18661..20745)
DNA (2085bp) protein (695aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z235_CLOBU
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ33730.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative ggdef domain-containing protein
L2_040_071G1_scaffold_96_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20847..22646)
DNA (1800bp) protein (600aa)
aspS1; aspartate--tRNA ligase AspS (EC:6.1.1.12)
Aspartate--tRNA ligase n=4 Tax=Clostridium butyricum RepID=B1R2Q7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93027.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_040_071G1_scaffold_96_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22867..24126)
DNA (1260bp) protein (420aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBW4_CLOBU
L2_040_071G1_scaffold_96_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24259..25686)
DNA (1428bp) protein (476aa)
Coproporphyrinogen dehydrogenase {ECO:0000313|EMBL:EEP54134.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEP54134.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hemZ; oxygen-independent coproporphyrinogen-III oxidase 2 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase 2 n=3 Tax=Clostridium butyricum RepID=B1R2Q5_CLOBU
L2_040_071G1_scaffold_96_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25848..26447)
DNA (600bp) protein (200aa)
Metallo-beta-lactamase family protein n=4 Tax=Clostridium butyricum RepID=B1R2Q4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93042.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
metallo-beta-lactamase family protein
L2_040_071G1_scaffold_96_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26550..26999)
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=3 Tax=Clostridium butyricum RepID=B1R2Q3_CLOBU
L2_040_071G1_scaffold_96_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27065..29278)
DNA (2214bp) protein (738aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:KJZ83633.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KJZ83633.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5)
RelA/SpoT family protein n=3 Tax=Clostridium butyricum RepID=C4IKU2_CLOBU
L2_040_071G1_scaffold_96_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29463..29981)
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
apt; adenine phosphoribosyltransferase Apt (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTX4_CLOBU
L2_040_071G1_scaffold_96_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30108..30986)
DNA (879bp) protein (293aa)
recJ1; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Phosphoesterase, RecJ domain protein n=2 Tax=Clostridium butyricum RepID=C4IKU0_CLOBU
Phosphoesterase, RecJ domain protein {ECO:0000313|EMBL:EEP53743.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_040_071G1_scaffold_96_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31117..31986)
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA31_CLOBU
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
secF; protein translocase subunit SecF
L2_040_071G1_scaffold_96_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31979..33238)
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=3 Tax=Clostridium butyricum RepID=C4IKT8_CLOBU
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
secD; protein translocase subunit SecD
Displaying items 1-30 of 60 in total

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