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L2_040_071G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_106_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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768..1811
-----------------
DNA (1044bp)
protein (348aa)
quinolinate synthetase complex subunit A (EC:2.1.1.63)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00567, ECO:0000256|SAAS:SAAS00012209}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00567, ECO:0000256|SAAS:SAAS00096027};; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
Quinolinate synthase A n=135 Tax=Enterobacteriaceae RepID=NADA_ECOBW
L2_040_071G1_scaffold_106_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1849..2568
-----------------
DNA (720bp)
protein (240aa)
Nicotinamide riboside transporter PnuC n=414 Tax=Enterobacteriaceae RepID=PNUC_ECOLI
pnuC; nicotinamide mononucleotide transporter
Nicotinamide riboside transporter PnuC {ECO:0000313|EMBL:ESD01571.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
L2_040_071G1_scaffold_106_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2565..3506)
-----------------
DNA (942bp)
protein (314aa)
Zinc transporter ZitB n=2 Tax=Escherichia coli RepID=L2V704_ECOLX
Zinc transporter ZitB {ECO:0000256|HAMAP-Rule:MF_00552}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
zitB; zinc transporter ZitB
L2_040_071G1_scaffold_106_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3620..4000)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein YbgS n=587 Tax=Enterobacteriaceae RepID=YBGS_ECOLI
putative homeobox protein
Putative homeobox protein {ECO:0000313|EMBL:EIQ26374.1}; TaxID=766150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri K-315.;"
L2_040_071G1_scaffold_106_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4316..5368
-----------------
DNA (1053bp)
protein (351aa)
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1051347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3.4880.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive n=698 Tax=Enterobacteriaceae RepID=AROG_ECO57
L2_040_071G1_scaffold_106_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5526..6278)
-----------------
DNA (753bp)
protein (251aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1410 Tax=Enterobacteriaceae RepID=GPMA_ECO27
gpmA; phosphoglyceromutase
L2_040_071G1_scaffold_106_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6480..7520)
-----------------
DNA (1041bp)
protein (347aa)
galactose mutarotase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
Aldose 1-epimerase n=513 Tax=cellular organisms RepID=GALM_ECOLI
L2_040_071G1_scaffold_106_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7514..8662)
-----------------
DNA (1149bp)
protein (383aa)
galK; galactokinase (EC:2.7.1.6)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
Galactokinase n=761 Tax=Enterobacteriaceae RepID=GAL1_ECO24
L2_040_071G1_scaffold_106_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8666..9712)
-----------------
DNA (1047bp)
protein (349aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
Galactose-1-phosphate uridylyltransferase n=2 Tax=Escherichia coli RepID=L2V890_ECOLX
galT; galactose-1-phosphate uridylyltransferase
L2_040_071G1_scaffold_106_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9722..10738)
-----------------
DNA (1017bp)
protein (339aa)
UDP-glucose 4-epimerase GalE {ECO:0000313|EMBL:KDZ38176.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KDZ38176.1};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
UDP-glucose 4-epimerase n=381 Tax=Enterobacteriaceae RepID=GALE_ECOLI
UDP-glucose 4-epimerase
L2_040_071G1_scaffold_106_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10999..12471)
-----------------
DNA (1473bp)
protein (491aa)
ABC transporter related n=12 Tax=Escherichia coli RepID=B1IXX6_ECOLC
putative molybdenum transport ATP-binding protein ModF
Molybdate ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELC10637.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_071G1_scaffold_106_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12539..13327)
-----------------
DNA (789bp)
protein (263aa)
Transcriptional regulator ModE n=942 Tax=Enterobacteriaceae RepID=MODE_ECO57
ModE family transcriptional regulator
Transcriptional regulator modE {ECO:0000313|EMBL:EQN31170.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_040_071G1_scaffold_106_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13456..13605
-----------------
DNA (150bp)
protein (50aa)
Multidrug efflux pump accessory protein AcrZ n=1439 Tax=Enterobacteriaceae RepID=ACRZ_ECO57
ybhT; hypothetical protein
Multidrug efflux pump accessory protein AcrZ {ECO:0000256|HAMAP-Rule:MF_01484}; AcrAB-TolC multidrug efflux pump accessory protein AcrZ {ECO:0000256|HAMAP-Rule:MF_01484}; Acridine resistance protein Z {ECO:0000256|HAMAP-Rule:MF_01484}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L2_040_071G1_scaffold_106_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13772..14545
-----------------
DNA (774bp)
protein (258aa)
Molybdate-binding periplasmic protein n=171 Tax=Escherichia RepID=MODA_ECOLI
modA; molybdate transporter periplasmic protein
Molybdate-binding periplasmic protein {ECO:0000313|EMBL:AFG39601.1}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P12b.;"
L2_040_071G1_scaffold_106_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14545..15234
-----------------
DNA (690bp)
protein (230aa)
Molybdenum transport system permease protein ModB n=799 Tax=Enterobacteriaceae RepID=MODB_ECO57
molybdate ABC transporter inner membrane subunit
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:EFU95275.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
L2_040_071G1_scaffold_106_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15237..16295
-----------------
DNA (1059bp)
protein (353aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
Molybdenum import ATP-binding protein ModC n=258 Tax=Enterobacteriaceae RepID=MODC_ECOLI
modC; molybdate transporter ATP-binding protein
L2_040_071G1_scaffold_106_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16296..17114)
-----------------
DNA (819bp)
protein (273aa)
Pyridoxal phosphate phosphatase YbhA n=175 Tax=Escherichia RepID=YBHA_ECOLI
cof family hydrolase
Phosphatase YbhA {ECO:0000313|EMBL:EIF86652.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
L2_040_071G1_scaffold_106_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17269..18264
-----------------
DNA (996bp)
protein (332aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000256|HAMAP-Rule:MF_01605, ECO:0000256|SAAS:SAAS00017521}; Short=6-P-gluconolactonase {ECO:0000256|HAMAP-Rule:MF_01605};; EC=3.1.1.31 {ECO:0000256|HAMAP-Rule:MF_01605, ECO:0000256|SAAS:SAAS00017517};; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
6-phosphogluconolactonase n=633 Tax=Enterobacteriaceae RepID=6PGL_ECO24
L2_040_071G1_scaffold_106_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18305..19258)
-----------------
DNA (954bp)
protein (318aa)
Predicted DNA-binding transcriptional regulator n=6 Tax=Escherichia RepID=A1A910_ECOK1
LysR family transcriptional regulator
LysR family transcriptional regulator YbhD {ECO:0000313|EMBL:EFE63270.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_040_071G1_scaffold_106_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19442..20449
-----------------
DNA (1008bp)
protein (336aa)
Uncharacterized protein n=96 Tax=Escherichia coli RepID=B7NA12_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ73916.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L2_040_071G1_scaffold_106_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20476..21909
-----------------
DNA (1434bp)
protein (478aa)
Inner membrane protein YbhI n=508 Tax=Enterobacteriaceae RepID=YBHI_ECOLI
transporter
Inner membrane protein ybhI {ECO:0000313|EMBL:EFE63272.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_040_071G1_scaffold_106_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22092..24353
-----------------
DNA (2262bp)
protein (754aa)
Uncharacterized protein n=227 Tax=Enterobacteriaceae RepID=B6I7S5_ECOSE
ybhJ; hypothetical protein
Aconitase family protein {ECO:0000313|EMBL:ESD01592.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
L2_040_071G1_scaffold_106_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24587..25870)
-----------------
DNA (1284bp)
protein (428aa)
Pectinesterase n=39 Tax=Escherichia coli RepID=B1IXL4_ECOLC
ybhC; outer membrane lipoprotein
Putative acyl-CoA thioester hydrolase ybhC {ECO:0000313|EMBL:KEN59096.1}; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C3.;"
L2_040_071G1_scaffold_106_24
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26005..27075)
-----------------
DNA (1071bp)
protein (357aa)
Phage integrase family protein n=167 Tax=root RepID=B5YRH2_ECO5E
phage integrase family protein
Integrase {ECO:0000313|EMBL:EIQ28483.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L2_040_071G1_scaffold_106_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27311..27478)
-----------------
DNA (168bp)
protein (56aa)
Uncharacterized protein n=26 Tax=root RepID=B7UN74_ECO27
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJW61889.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_040_071G1_scaffold_106_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27536..28336)
-----------------
DNA (801bp)
protein (267aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=E0IXR4_ECOLW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH12200.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L2_040_071G1_scaffold_106_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28414..28674)
-----------------
DNA (261bp)
protein (87aa)
Putative eaa protein n=2 Tax=Escherichia coli RepID=N2WIY0_ECOLX
Eaa protein {ECO:0000313|EMBL:KJW52644.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Phage protein
L2_040_071G1_scaffold_106_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28671..29324)
-----------------
DNA (654bp)
protein (218aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3176-1 RepID=T8YJG2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELC10653.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_071G1_scaffold_106_29
unknown

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comp(29308..29517)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

L2_040_071G1_scaffold_106_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29521..30072)
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE51 RepID=L3KWW0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELE02887.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
hypothetical protein
Displaying items 1-30 of 90 in total

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