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L2_040_071G1_scaffold_134

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_134_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 1 {ECO:0000313|EMBL:KEO32264.1}; EC=2.3.1.41 {ECO:0000313|EMBL:KEO32264.1};; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
3-oxoacyl-[acyl-carrier-protein] synthase 1 n=1 Tax=Escherichia coli KTE100 RepID=S1H508_ECOLX
L2_040_071G1_scaffold_134_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258..2258
DNA (2001bp) protein (667aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Citrobacter sp. KTE30 RepID=R8UT73_9ENTR
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
mnmC; FAD-dependent oxidoreductase
L2_040_071G1_scaffold_134_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2373..2648)
DNA (276bp) protein (92aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M764_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC05051.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_071G1_scaffold_134_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2681..3229)
DNA (549bp) protein (183aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=K8QSJ6_CITFR
Putative transporting ATPase {ECO:0000313|EMBL:CDL36885.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_040_071G1_scaffold_134_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3229..4038)
DNA (810bp) protein (270aa)
Transmembrane protein YfcA n=6 Tax=Citrobacter RepID=J0M0Y9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC05053.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_071G1_scaffold_134_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4038..4862)
DNA (825bp) protein (275aa)
Penicillin-insensitive murein endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067071}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067077};; D-alanyl-D-alanine-endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623}; Flags: Precursor;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Penicillin-insensitive murein endopeptidase n=5 Tax=Citrobacter RepID=J0VMC3_9ENTR
mepA; murein endopeptidase
L2_040_071G1_scaffold_134_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4866..5951)
DNA (1086bp) protein (362aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; Chorismate synthase; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=7 Tax=Citrobacter RepID=J1FYV2_9ENTR
L2_040_071G1_scaffold_134_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5991..6923)
DNA (933bp) protein (311aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
50S ribosomal protein L3 glutamine methyltransferase n=8 Tax=Citrobacter RepID=C1M769_9ENTR
SAM-dependent methyltransferase
L2_040_071G1_scaffold_134_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7090..7641
DNA (552bp) protein (184aa)
UPF0115 protein CSAG_02175 n=4 Tax=Citrobacter RepID=C1M770_9ENTR
UPF0115 protein TN42_14405 {ECO:0000256|HAMAP-Rule:MF_01042}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_071G1_scaffold_134_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7722..8207)
DNA (486bp) protein (162aa)
Phosphohistidine phosphatase sixA n=9 Tax=Citrobacter RepID=C1M771_9ENTR
Phosphohistidine phosphatase {ECO:0000313|EMBL:KKC63194.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
phosphohistidine phosphatase
L2_040_071G1_scaffold_134_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8416..10563)
DNA (2148bp) protein (716aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3)
Fatty acid oxidation complex subunit alpha n=3 Tax=Citrobacter RepID=J0VMB7_9ENTR
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01617, ECO:0000256|SAAS:SAAS00051619}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_071G1_scaffold_134_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10563..11873)
DNA (1311bp) protein (437aa)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01618}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01618};; ACSs {ECO:0000256|HAMAP-Rule:MF_01618}; Acetyl-CoA acyltransferase {ECO:0000256|HAMAP-Rule:MF_01618}; Acyl-CoA ligase {ECO:0000256|HAMAP-Rule:MF_01618}; Beta-ketothiolase {ECO:0000256|HAMAP-Rule:MF_01618}; Fatty acid oxidation complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01618}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fadI; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase n=4 Tax=Citrobacter RepID=J1FYU4_9ENTR
L2_040_071G1_scaffold_134_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12049..12333)
DNA (285bp) protein (95aa)
Protein YfcZ n=3 Tax=Citrobacter RepID=J0LUP4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX69713.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_134_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12705..13985
DNA (1281bp) protein (427aa)
Long-chain fatty acid outer membrane transporter n=2 Tax=Citrobacter RepID=M3CHA3_CITFR
Long-chain fatty acid outer membrane transporter {ECO:0000313|EMBL:KJC10000.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
long-chain fatty acid outer membrane transporter
L2_040_071G1_scaffold_134_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14045..14800)
DNA (756bp) protein (252aa)
Uncharacterized protein n=9 Tax=Citrobacter RepID=C1M777_9ENTR
ABC transporter permease {ECO:0000313|EMBL:KKC63189.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
ABC transporter permease
L2_040_071G1_scaffold_134_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15089..16030
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QNX7_CITFR
Membrane protein {ECO:0000313|EMBL:KJC10002.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_040_071G1_scaffold_134_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16229..16858)
DNA (630bp) protein (210aa)
Dna-binding protein n=4 Tax=Citrobacter RepID=J0M284_9ENTR
Helix-turn-helix domain protein {ECO:0000313|EMBL:KEL80841.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
DNA-binding protein
L2_040_071G1_scaffold_134_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17033..18931)
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BI54_CITFR
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:KEL80840.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
chemotaxis protein
L2_040_071G1_scaffold_134_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19305..19844
DNA (540bp) protein (180aa)
Nucleoprotein/polynucleotide-associated enzyme n=2 Tax=Citrobacter RepID=K8QSI6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05086.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_071G1_scaffold_134_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19950..21197)
DNA (1248bp) protein (416aa)
Activator protein n=3 Tax=Citrobacter RepID=J1G028_9ENTR
Phosphoglycerate transport system transcriptional regulatory protein pgtA {ECO:0000313|EMBL:ETX69720.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_040_071G1_scaffold_134_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21187..23196)
DNA (2010bp) protein (670aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D0Z0_CITFR
histidine kinase
L2_040_071G1_scaffold_134_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23193..24455)
DNA (1263bp) protein (421aa)
Phosphoglycerate transport regulatory protein pgtC n=2 Tax=Citrobacter RepID=R8UT99_9ENTR
Phosphoglycerate transport regulatory protein pgtC {ECO:0000313|EMBL:ETX69722.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ABC transporter substrate-binding protein
L2_040_071G1_scaffold_134_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24808..26199
DNA (1392bp) protein (464aa)
Phosphoglycerate transporter n=3 Tax=Citrobacter RepID=J1FZW5_9ENTR
Phosphoglycerate transporter {ECO:0000313|EMBL:ETX69723.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
phosphoglycerate transporter
L2_040_071G1_scaffold_134_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26308..26550)
DNA (243bp) protein (81aa)
Inner membrane protein n=6 Tax=Citrobacter RepID=J0LVX5_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC05090.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_040_071G1_scaffold_134_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26991..27911
DNA (921bp) protein (307aa)
Lipid A biosynthesis palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; EC=2.3.1.242 {ECO:0000256|HAMAP-Rule:MF_01943};; Kdo(2)-lipid IV(A) palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Lipid A biosynthesis lauroyl (Or palmitoleoyl) acyltransferase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R0W8_CITFR
lipid A biosynthesis palmitoleoyl acyltransferase
L2_040_071G1_scaffold_134_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27953..28555)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QNW6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX69726.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_134_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29051..30289)
DNA (1239bp) protein (413aa)
Aminotransferase n=6 Tax=Citrobacter RepID=J0M294_9ENTR
Glutamate-pyruvate aminotransferase {ECO:0000313|EMBL:KJC05093.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glutamate-pyruvate aminotransferase
L2_040_071G1_scaffold_134_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30614..32374
DNA (1761bp) protein (587aa)
Inner membrane protein ypdA n=3 Tax=Citrobacter RepID=J1FZW9_9ENTR
Inner membrane protein ypdA {ECO:0000313|EMBL:KDF14120.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
membrane protein
L2_040_071G1_scaffold_134_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32389..33123
DNA (735bp) protein (245aa)
Protein mrkE n=1 Tax=Citrobacter sp. KTE30 RepID=R8USH5_9ENTR
LytTR family transcriptional regulator {ECO:0000313|EMBL:KJC07884.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LytTR family transcriptional regulator
L2_040_071G1_scaffold_134_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33139..34002
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DQD0_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL80826.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
AraC family transcriptional regulator
Displaying items 1-30 of 46 in total

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