ggKbase home page

L2_040_071G1_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_138_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1228
DNA (1227bp) protein (409aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=2 Tax=Escherichia coli RepID=L2UZ56_ECOLX
L2_040_071G1_scaffold_138_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1426..2619)
DNA (1194bp) protein (398aa)
ROK family protein n=115 Tax=Enterobacteriaceae RepID=B1LNK6_ECOSM
ROK-family regulatory protein
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AEQ13732.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
L2_040_071G1_scaffold_138_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2737..6018
DNA (3282bp) protein (1094aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L2UZC9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELC07515.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_071G1_scaffold_138_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6115..7098
DNA (984bp) protein (328aa)
ABC transporter periplasmic-binding protein yphF n=2 Tax=Escherichia coli RepID=L2UY27_ECOLX
ABC transporter periplasmic-binding protein yphF {ECO:0000313|EMBL:ELC07514.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
yphF; periplasmic binding protein/LacI transcriptional regulator precursor
L2_040_071G1_scaffold_138_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7121..8632
DNA (1512bp) protein (504aa)
ABC transporter related n=98 Tax=Enterobacteriaceae RepID=B1IVT0_ECOLC
ABC transporter-like protein
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDV31560.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_040_071G1_scaffold_138_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8657..9655
DNA (999bp) protein (333aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase n=46 Tax=Escherichia coli RepID=B1IVT1_ECOLC
Sugar ABC transporter membrane protein {ECO:0000313|EMBL:ELC07512.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_071G1_scaffold_138_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9721..10782
DNA (1062bp) protein (354aa)
Oxidoreductase, zinc-binding dehydrogenase family n=228 Tax=Enterobacteriaceae RepID=A8A351_ECOHS
alcohol dehydrogenase
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:END51960.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
L2_040_071G1_scaffold_138_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10794..11666
DNA (873bp) protein (291aa)
Aldose 1-epimerase n=29 Tax=Escherichia coli RepID=B1IVT3_ECOLC
aldose 1-epimerase family protein
Aldose 1-epimerase {ECO:0000313|EMBL:EOW17576.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE108.;"
L2_040_071G1_scaffold_138_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11714..12136)
DNA (423bp) protein (141aa)
DoxD-like family protein n=9 Tax=Escherichia coli RepID=B2N370_ECOLX
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:EIG82498.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_040_071G1_scaffold_138_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12233..13435)
DNA (1203bp) protein (401aa)
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component {ECO:0000256|HAMAP-Rule:MF_01651}; EC=1.18.1.3 {ECO:0000256|HAMAP-Rule:MF_01651};; Digoxigenin system ferredoxin--NAD(+) reductase component {ECO:0000256|HAMAP-Rule:MF_01651}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component n=1 Tax=Escherichia coli KTE10 RepID=L2UWW4_ECOLX
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L2_040_071G1_scaffold_138_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13445..14257)
DNA (813bp) protein (271aa)
3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; EC=1.3.1.87 {ECO:0000256|HAMAP-Rule:MF_01647};; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; CI-dihydrodiol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; Cis-3-(2-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; Cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; PP-dihydrodiol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; TaxID=1444215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-110-08_S4_C1.;"
3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase n=432 Tax=Enterobacteriaceae RepID=HCAB_ECO24
hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
L2_040_071G1_scaffold_138_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14254..14574)
DNA (321bp) protein (107aa)
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit n=744 Tax=Enterobacteriaceae RepID=HCAC_ECO24
hcaC; 3-phenylpropionate/cinnamic acid dioxygenaseferredoxin subunit
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit {ECO:0000256|HAMAP-Rule:MF_01650}; Digoxigenin ferredoxin subunit {ECO:0000256|HAMAP-Rule:MF_01650}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L2_040_071G1_scaffold_138_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14574..15092)
DNA (519bp) protein (173aa)
3-phenylpropionate/cinnamic acid dioxygenase subunit beta {ECO:0000256|HAMAP-Rule:MF_01649}; EC=1.14.12.19 {ECO:0000256|HAMAP-Rule:MF_01649};; Digoxigenin subunit beta {ECO:0000256|HAMAP-Rule:MF_01649}; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.5.;"
3-phenylpropionate/cinnamic acid dioxygenase subunit beta n=114 Tax=Enterobacteriaceae RepID=HCAF_ECO7I
3-phenylpropionate dioxygenase subunit beta
L2_040_071G1_scaffold_138_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15089..16450)
DNA (1362bp) protein (454aa)
3-phenylpropionate/cinnamic acid dioxygenase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01648}; EC=1.14.12.19 {ECO:0000256|HAMAP-Rule:MF_01648};; Digoxigenin subunit alpha {ECO:0000256|HAMAP-Rule:MF_01648}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
3-phenylpropionate/cinnamic acid dioxygenase subunit alpha n=818 Tax=Bacteria RepID=HCAE_ECO57
Aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein
L2_040_071G1_scaffold_138_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16586..17476
DNA (891bp) protein (297aa)
Hca operon transcriptional activator n=1 Tax=Escherichia coli 113290 RepID=U9YC38_ECOLX
DNA-binding transcriptional regulator HcaR
Hca operon transcriptional activator {ECO:0000313|EMBL:EGI20896.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L2_040_071G1_scaffold_138_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17636..18775
DNA (1140bp) protein (380aa)
3-phenylpropionic acid transporter n=51 Tax=Escherichia RepID=A8A342_ECOHS
hcaT; HcaT MFS transporter
MFS transporter, phenyl propionate permease family protein {ECO:0000313|EMBL:EMX01083.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
L2_040_071G1_scaffold_138_17
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18767..20047)
DNA (1281bp) protein (427aa)
Transcriptional antiterminator, BglG n=67 Tax=Escherichia coli RepID=B1IWC6_ECOLC
stationary phase inducible protein CsiE
Stationary phase inducible protein CsiE {ECO:0000313|EMBL:CDK74213.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
L2_040_071G1_scaffold_138_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20238..21092)
DNA (855bp) protein (285aa)
Peptidase n=4 Tax=Escherichia coli RepID=L2UZB5_ECOLX
putative enzyme
Uncharacterized protein {ECO:0000313|EMBL:KIG81776.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_040_071G1_scaffold_138_19
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21237..22040)
DNA (804bp) protein (268aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase {ECO:0000313|EMBL:EFW55459.1}; EC=3.1.3.25 {ECO:0000313|EMBL:EFW55459.1};; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Inositol-1-monophosphatase n=1345 Tax=Enterobacteriaceae RepID=SUHB_ECO57
L2_040_071G1_scaffold_138_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22159..22899
DNA (741bp) protein (247aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
RNA methyltransferase, TrmH family, group 1 n=10 Tax=Escherichia coli RepID=B1IWC9_ECOLC
RNA methyltransferase
L2_040_071G1_scaffold_138_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23260..23748
DNA (489bp) protein (163aa)
HTH-type transcriptional regulator IscR n=1222 Tax=Enterobacteriaceae RepID=ISCR_ECO24
iscR; DNA-binding transcriptional repressor
HTH-type transcriptional regulator IscR {ECO:0000256|HAMAP-Rule:MF_01176}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L2_040_071G1_scaffold_138_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23860..25074
DNA (1215bp) protein (405aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
Cysteine desulfurase n=1398 Tax=Bacteria RepID=ISCS_ECO24
L2_040_071G1_scaffold_138_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25102..25488
DNA (387bp) protein (129aa)
NifU-like protein n=1380 Tax=Enterobacteriaceae RepID=NIFU_ECO57
scaffold protein
NifU-like protein {ECO:0000313|EMBL:EMX31345.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
L2_040_071G1_scaffold_138_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25505..25828
DNA (324bp) protein (108aa)
Iron-binding protein IscA n=1441 Tax=Enterobacteriaceae RepID=ISCA_ECO27
iscA; FeS cluster assembly protein
Iron-binding protein IscA {ECO:0000256|HAMAP-Rule:MF_01429, ECO:0000256|SAAS:SAAS00037071}; Iron-sulfur cluster assembly protein {ECO:0000256|HAMAP-Rule:MF_01429}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_040_071G1_scaffold_138_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25924..26439
DNA (516bp) protein (172aa)
Co-chaperone protein HscB n=11 Tax=Escherichia coli RepID=B2N386_ECOLX
Co-chaperone protein HscB {ECO:0000256|HAMAP-Rule:MF_00682}; Hsc20 {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
co-chaperone Hsc20
L2_040_071G1_scaffold_138_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26456..28306
DNA (1851bp) protein (617aa)
Fe-S protein assembly chaperone HscA (EC:1.3.1.74)
Chaperone protein HscA n=794 Tax=Enterobacteriaceae RepID=HSCA_ECO45
Chaperone protein HscA {ECO:0000256|HAMAP-Rule:MF_00679}; Hsc66 {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L2_040_071G1_scaffold_138_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28308..28643
DNA (336bp) protein (112aa)
Ferredoxin, 2Fe-2S type, ISC system n=85 Tax=Enterobacteriaceae RepID=A7ZPW8_ECO24
2Fe-2S ferredoxin
Ferredoxin, 2Fe-2S type, ISC system {ECO:0000313|EMBL:ENB27184.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L2_040_071G1_scaffold_138_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28655..28855
DNA (201bp) protein (67aa)
Protein IscX n=1144 Tax=Enterobacteriaceae RepID=ISCX_ECO57
yfhJ; Protein iscX
FeS assembly protein IscX {ECO:0000313|EMBL:EHW15749.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L2_040_071G1_scaffold_138_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28914..30197
DNA (1284bp) protein (428aa)
aminopeptidase B (EC:3.4.11.23)
Peptidase B {ECO:0000256|HAMAP-Rule:MF_00504}; EC=3.4.11.23 {ECO:0000256|HAMAP-Rule:MF_00504};; Aminopeptidase B {ECO:0000256|HAMAP-Rule:MF_00504}; TaxID=1116072 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.11.;"
Peptidase B n=82 Tax=Escherichia coli RepID=B2N390_ECOLX
L2_040_071G1_scaffold_138_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30339..31115
DNA (777bp) protein (259aa)
Protein SseB n=175 Tax=Enterobacteriaceae RepID=SSEB_ECOLI
sseB; enhanced serine sensitivity protein SseB
SseB family protein {ECO:0000313|EMBL:KDZ36591.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
Displaying items 1-30 of 105 in total

View Taxonomy