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L2_040_071G1_scaffold_141

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_141_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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55..1317
DNA (1263bp) protein (421aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=3 Tax=Citrobacter RepID=K8QTM4_CITFR
Sugar transporter {ECO:0000313|EMBL:ETX67510.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
permease
L2_040_071G1_scaffold_141_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1328..3283
DNA (1956bp) protein (652aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QZX8_CITFR
COG3533 secreted protein {ECO:0000313|EMBL:CDL39530.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_040_071G1_scaffold_141_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3371..4111)
DNA (741bp) protein (247aa)
Outer membrane protein n=5 Tax=Citrobacter RepID=K8QV87_CITFR
Membrane protein {ECO:0000313|EMBL:KJC05285.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_040_071G1_scaffold_141_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4233..5195
DNA (963bp) protein (321aa)
DNA-binding transcriptional regulator n=2 Tax=Citrobacter RepID=M3D491_CITFR
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC05286.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
yiaU; putative DNA-binding transcriptional regulator
L2_040_071G1_scaffold_141_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5203..6339)
DNA (1137bp) protein (379aa)
Inner membrane protein YiaV n=4 Tax=Citrobacter RepID=J0M696_9ENTR
Inner membrane protein yiaV {ECO:0000313|EMBL:ETX67514.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_071G1_scaffold_141_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6345..6668)
DNA (324bp) protein (108aa)
Inner membrane protein yiaW n=6 Tax=Citrobacter RepID=G9SC04_CITFR
Inner membrane protein yiaW {ECO:0000313|EMBL:ETX67515.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_071G1_scaffold_141_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6880..8418)
DNA (1539bp) protein (513aa)
Aldehyde dehydrogenase B n=4 Tax=Enterobacteriaceae RepID=I6HIH2_SHIFL
Aldehyde dehydrogenase B {ECO:0000313|EMBL:ETX67516.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
aldehyde dehydrogenase
L2_040_071G1_scaffold_141_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8511..9662)
DNA (1152bp) protein (384aa)
Alcohol dehydrogenase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D486_CITFR
Fe-containing alcohol dehydrogenase {ECO:0000313|EMBL:ETX67517.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
alcohol dehydrogenase
L2_040_071G1_scaffold_141_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9852..11696)
DNA (1845bp) protein (615aa)
Selenocysteine-specific elongation factor n=4 Tax=Citrobacter RepID=J0VSF7_9ENTR
Selenocysteine-specific elongation factor {ECO:0000313|EMBL:ETX67518.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
selenocysteinyl-tRNA-specific translation factor
L2_040_071G1_scaffold_141_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11693..13084)
DNA (1392bp) protein (464aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; L-seryl-tRNA(Sec) selenium transferase; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=3 Tax=Citrobacter RepID=J0M6A1_9ENTR
L2_040_071G1_scaffold_141_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13183..13791)
DNA (609bp) protein (203aa)
Glutathione S-transferase n=6 Tax=Citrobacter RepID=K8QTL6_CITFR
Glutathione S-transferase, C-terminal domain protein {ECO:0000313|EMBL:KEL79895.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
glutathione S-transferase
L2_040_071G1_scaffold_141_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13862..14998)
DNA (1137bp) protein (379aa)
Secretion protein HlyD family protein n=6 Tax=Citrobacter RepID=J0LZR0_9ENTR
Membrane fusion component of tripartite multidrug resistance system {ECO:0000313|EMBL:CDL39542.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
secretion protein HlyD family protein
L2_040_071G1_scaffold_141_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15001..15363)
DNA (363bp) protein (121aa)
Inner membrane protein n=5 Tax=Citrobacter RepID=J1G3V8_9ENTR
Inner membrane protein yiaW {ECO:0000313|EMBL:ETX67522.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
SBOV37721; inner membrane protein YiaW
L2_040_071G1_scaffold_141_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15895..17811
DNA (1917bp) protein (639aa)
PTS system mannitol-specific EIICBA component {ECO:0000313|EMBL:KEL79890.1}; EC=2.7.1.- {ECO:0000313|EMBL:KEL79890.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
PTS system mannitol-specific EIICBA component n=5 Tax=Citrobacter RepID=J0VSG1_9ENTR
PTS system mannitol-specific transporter subunit IICBA
L2_040_071G1_scaffold_141_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18032..19180
DNA (1149bp) protein (383aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Mannitol-1-phosphate 5-dehydrogenase n=5 Tax=Citrobacter RepID=J0M6A6_9ENTR
mannitol-1-phosphate 5-dehydrogenase
L2_040_071G1_scaffold_141_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19177..19767
DNA (591bp) protein (197aa)
Mannitol operon repressor n=8 Tax=Citrobacter RepID=C1MDQ8_9ENTR
Mannitol operon repressor {ECO:0000313|EMBL:ETX67525.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
mtlR; mannitol repressor protein
L2_040_071G1_scaffold_141_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19780..19986)
DNA (207bp) protein (69aa)
Cytoplasmic protein n=6 Tax=Citrobacter RepID=J0LZR3_9ENTR
Putative cytoplasmic protein {ECO:0000313|EMBL:CDL39548.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_040_071G1_scaffold_141_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20279..20641
DNA (363bp) protein (121aa)
Cytoplasmic protein n=5 Tax=Citrobacter RepID=J1G3W8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC11769.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_071G1_scaffold_141_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20905..22560
DNA (1656bp) protein (552aa)
L-lactate permease n=3 Tax=Citrobacter RepID=K8QRT7_CITFR
L-lactate permease {ECO:0000313|EMBL:KEL79885.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L-lactate permease
L2_040_071G1_scaffold_141_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22557..23333
DNA (777bp) protein (259aa)
DNA-binding transcriptional repressor LldR n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTK8_CITFR
Transcriptional regulator {ECO:0000313|EMBL:KJC04698.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_040_071G1_scaffold_141_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23330..24520
DNA (1191bp) protein (397aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019080}; EC=1.1.-.- {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019079};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lldD; lactate dehydrogenase (EC:1.1.2.3)
L-lactate dehydrogenase [cytochrome] n=3 Tax=Citrobacter RepID=J1G3K7_9ENTR
L2_040_071G1_scaffold_141_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24716..26056
DNA (1341bp) protein (447aa)
Major facilitator transporter n=3 Tax=Citrobacter RepID=J0LZR6_9ENTR
Major facilitator transporter {ECO:0000313|EMBL:ETX67531.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
4-hydroxybenzoate transporter
L2_040_071G1_scaffold_141_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26103..26576
DNA (474bp) protein (158aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=3 Tax=Citrobacter RepID=J1G3X2_9ENTR
rRNA methylase
L2_040_071G1_scaffold_141_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26663..27484)
DNA (822bp) protein (274aa)
Serine acetyltransferase {ECO:0000313|EMBL:KJC04701.1}; EC=2.3.1.30 {ECO:0000313|EMBL:KJC04701.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=10 Tax=Enterobacteriaceae RepID=C1MDR5_9ENTR
L2_040_071G1_scaffold_141_25
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27563..28582)
DNA (1020bp) protein (340aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=4 Tax=Enterobacteriaceae RepID=I6HIF3_SHIFL
glycerol-3-phosphate dehydrogenase
L2_040_071G1_scaffold_141_26
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28582..29049)
DNA (468bp) protein (156aa)
Protein-export protein SecB n=13 Tax=Enterobacteriaceae RepID=SECB_CITK8
preprotein translocase subunit SecB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_071G1_scaffold_141_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29096..29347)
DNA (252bp) protein (84aa)
Glutaredoxin-3 n=10 Tax=Enterobacteriaceae RepID=C1MDR8_9ENTR
glutaredoxin
Glutaredoxin-3 {ECO:0000313|EMBL:ETX67536.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_071G1_scaffold_141_28
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29400..29831)
DNA (432bp) protein (144aa)
Uncharacterized protein n=9 Tax=Citrobacter RepID=C1MDR9_9ENTR
hypothetical protein
Rhodanese-like protein {ECO:0000313|EMBL:EFE06283.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L2_040_071G1_scaffold_141_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30080..31624
DNA (1545bp) protein (515aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=3 Tax=Citrobacter RepID=K8QRS7_CITFR
phosphoglyceromutase
L2_040_071G1_scaffold_141_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31634..32917
DNA (1284bp) protein (428aa)
AmiB activator n=2 Tax=Citrobacter freundii RepID=K8QTK1_CITFR
Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP {ECO:0000313|EMBL:CDL39564.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
AmiB activator
Displaying items 1-30 of 50 in total

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