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L2_040_071G1_scaffold_156

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_156_1
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22..189)
-----------------
DNA (168bp)
protein (56aa)
Uncharacterized protein n=3 Tax=Klebsiella pneumoniae RepID=M3UAF2_KLEPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM87914.1}; TaxID=1420012 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae 30660/NJST258_1.;"
L2_040_071G1_scaffold_156_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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501..1490
-----------------
DNA (990bp)
protein (330aa)
L-arabinose-binding periplasmic protein n=7 Tax=Citrobacter RepID=J1FYJ7_9ENTR
L-arabinose-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR002816}; Short=ABP {ECO:0000256|PIRNR:PIRNR002816};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
sugar ABC transporter substrate-binding protein
L2_040_071G1_scaffold_156_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1606..3120
-----------------
DNA (1515bp)
protein (505aa)
Arabinose import ATP-binding protein AraG {ECO:0000256|HAMAP-Rule:MF_01721}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01721};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
araG; L-arabinose transporter ATP-binding protein (EC:3.6.3.17)
Arabinose import ATP-binding protein AraG n=1 Tax=Citrobacter sp. KTE30 RepID=R8URY6_9ENTR
L2_040_071G1_scaffold_156_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3135..4121
-----------------
DNA (987bp)
protein (329aa)
araH; L-arabinose transporter permease (EC:3.6.3.17)
L-arabinose transport system permease AraH n=7 Tax=Citrobacter RepID=G9SKR9_CITFR
L-arabinose transport system permease AraH {ECO:0000313|EMBL:ETX69266.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_071G1_scaffold_156_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4297..5100
-----------------
DNA (804bp)
protein (268aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Trehalose-phosphate phosphatase n=3 Tax=Citrobacter RepID=J0M0N2_9ENTR
trehalose phosphatase
L2_040_071G1_scaffold_156_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5075..6496
-----------------
DNA (1422bp)
protein (474aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Trehalose-6-phosphate synthase n=3 Tax=Citrobacter RepID=J0VM11_9ENTR
trehalose-6-phosphate synthase
L2_040_071G1_scaffold_156_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6514..6942)
-----------------
DNA (429bp)
protein (143aa)
Universal stress protein n=6 Tax=Citrobacter RepID=J1FYJ3_9ENTR
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
universal stress protein UspC
L2_040_071G1_scaffold_156_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7736..8077
-----------------
DNA (342bp)
protein (114aa)
Flagellar transcriptional regulator FlhD n=8 Tax=Citrobacter RepID=D4B895_9ENTR
transcriptional regulator
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_040_071G1_scaffold_156_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8077..8658
-----------------
DNA (582bp)
protein (194aa)
Flagellar transcriptional regulator FlhC n=8 Tax=Citrobacter RepID=C1M5R5_9ENTR
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transcriptional regulator
L2_040_071G1_scaffold_156_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8783..9670
-----------------
DNA (888bp)
protein (296aa)
Motility protein A n=8 Tax=Citrobacter RepID=C1M5R4_9ENTR
Motility protein A {ECO:0000313|EMBL:ETX69260.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flagellar motor protein MotA
L2_040_071G1_scaffold_156_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9667..10596
-----------------
DNA (930bp)
protein (310aa)
Motility protein B n=8 Tax=Citrobacter RepID=C1M5R3_9ENTR
Flagellar motor rotation protein MotB {ECO:0000313|EMBL:CDL38832.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
motB; flagellar motor protein MotB
L2_040_071G1_scaffold_156_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10601..12637
-----------------
DNA (2037bp)
protein (679aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Chemotaxis protein CheA n=5 Tax=Citrobacter RepID=J1FYI9_9ENTR
chemotaxis protein CheA
L2_040_071G1_scaffold_156_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12658..13161
-----------------
DNA (504bp)
protein (168aa)
Chemotaxis protein CheW n=8 Tax=Enterobacteriaceae RepID=C1M5R1_9ENTR
Positive regulator of CheA protein activity (CheW) {ECO:0000313|EMBL:CDL40137.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
chemotaxis protein CheW
L2_040_071G1_scaffold_156_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13238..14497)
-----------------
DNA (1260bp)
protein (420aa)
Sodium:dicarboxylate symporter n=3 Tax=Citrobacter RepID=J1FYB8_9ENTR
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ETX69256.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
C4-dicarboxylate ABC transporter
L2_040_071G1_scaffold_156_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14904..16559
-----------------
DNA (1656bp)
protein (552aa)
Methyl-accepting chemotaxis protein II n=3 Tax=Citrobacter RepID=G9SKQ7_CITFR
Methyl-accepting chemotaxis protein II {ECO:0000313|EMBL:ETX69255.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
chemotaxis protein
L2_040_071G1_scaffold_156_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16603..18204
-----------------
DNA (1602bp)
protein (534aa)
Methyl-accepting protein IV n=3 Tax=Citrobacter RepID=J0VM00_9ENTR
Methyl-accepting protein IV {ECO:0000313|EMBL:KJC10316.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
methyl-accepting protein IV
L2_040_071G1_scaffold_156_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18224..19096
-----------------
DNA (873bp)
protein (291aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Chemotaxis protein methyltransferase n=3 Tax=Citrobacter RepID=K8QT89_CITFR
chemotaxis protein CheR
L2_040_071G1_scaffold_156_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19093..20142
-----------------
DNA (1050bp)
protein (350aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
chemotaxis protein (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=4 Tax=Citrobacter RepID=J0LUE3_9ENTR
L2_040_071G1_scaffold_156_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20160..20549
-----------------
DNA (390bp)
protein (130aa)
Chemotaxis protein CheY n=7 Tax=Citrobacter RepID=C1M5Q5_9ENTR
Chemotaxis protein CheY {ECO:0000313|EMBL:KEL81372.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
chemotaxis protein CheY
L2_040_071G1_scaffold_156_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20557..21204
-----------------
DNA (648bp)
protein (216aa)
Protein phosphatase CheZ {ECO:0000256|PIRNR:PIRNR002884}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR002884};; Chemotaxis protein CheZ {ECO:0000256|PIRNR:PIRNR002884}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Protein phosphatase CheZ n=8 Tax=Citrobacter RepID=C1M5Q4_9ENTR
chemotaxis protein CheZ
L2_040_071G1_scaffold_156_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21363..22514
-----------------
DNA (1152bp)
protein (384aa)
Flagellar biosynthesis protein FlhB n=5 Tax=Citrobacter RepID=J0VLZ5_9ENTR
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:KJC10311.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
flhB; flagellar biosynthesis protein FlhB
L2_040_071G1_scaffold_156_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22507..24585
-----------------
DNA (2079bp)
protein (693aa)
Flagellar biosynthesis protein FlhA n=6 Tax=Citrobacter RepID=J1FYI1_9ENTR
Flagellar biosynthesis protein flhA {ECO:0000313|EMBL:KDF14397.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
flagellar biosynthesis protein FlhA
L2_040_071G1_scaffold_156_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24585..24977
-----------------
DNA (393bp)
protein (131aa)
Flagellar protein flhE n=5 Tax=Citrobacter RepID=J0LUD9_9ENTR
Flagellar protein flhE {ECO:0000313|EMBL:KEL81376.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
flagellar protein flhE
L2_040_071G1_scaffold_156_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25286..26425
-----------------
DNA (1140bp)
protein (380aa)
Glycosyl family protein n=4 Tax=Citrobacter RepID=J1FYB1_9ENTR
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:KJC08748.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glycosyl hydrolase family 88
L2_040_071G1_scaffold_156_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26397..28334)
-----------------
DNA (1938bp)
protein (646aa)
Penicillin-binding protein 2 n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DUW0_CITFR
Penicillin-binding protein {ECO:0000313|EMBL:KJC08747.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
penicillin-binding protein
L2_040_071G1_scaffold_156_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28562..30295)
-----------------
DNA (1734bp)
protein (578aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Arginine--tRNA ligase n=4 Tax=Citrobacter RepID=J0VLZ0_9ENTR
arginyl-tRNA synthetase
L2_040_071G1_scaffold_156_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30534..31100
-----------------
DNA (567bp)
protein (189aa)
Protein yecM n=5 Tax=Citrobacter RepID=J1FYH6_9ENTR
Protein yecM {ECO:0000313|EMBL:CDL42052.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L2_040_071G1_scaffold_156_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31103..31849
-----------------
DNA (747bp)
protein (249aa)
Copper homeostasis protein CutC n=3 Tax=Citrobacter RepID=J0LUD6_9ENTR
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
copper homeostasis protein CutC
L2_040_071G1_scaffold_156_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32013..32981)
-----------------
DNA (969bp)
protein (323aa)
tRNA (mo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194472}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194476};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tRNA (mo5U34)-methyltransferase n=3 Tax=Citrobacter RepID=J1FYA6_9ENTR
tRNA methyltransferase
L2_040_071G1_scaffold_156_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32978..33721)
-----------------
DNA (744bp)
protein (248aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01589};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
tRNA (cmo5U34)-methyltransferase n=6 Tax=Citrobacter RepID=J0M0L0_9ENTR
tRNA methyltransferase
Displaying items 1-30 of 56 in total

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