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L2_040_071G1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_162_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116..331
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=4 Tax=Enterobacteriaceae RepID=R4YIT2_KLEPN
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_071G1_scaffold_162_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

569..2314
DNA (1746bp) protein (582aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=6 Tax=Citrobacter RepID=J1G4M1_9ENTR
L2_040_071G1_scaffold_162_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2755..4299
DNA (1545bp) protein (515aa)
RNA polymerase sigma factor RpoD n=8 Tax=Citrobacter RepID=C1MBL1_9ENTR
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
RNA polymerase sigma factor RpoD
L2_040_071G1_scaffold_162_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4461..5510
DNA (1050bp) protein (350aa)
Putative receptor n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSW3_CITFR
Putative receptor {ECO:0000313|EMBL:EIQ70362.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
putative receptor
L2_040_071G1_scaffold_162_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5521..7518
DNA (1998bp) protein (666aa)
TonB-dependent receptor n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QZ29_CITFR
TonB-dependent receptor {ECO:0000313|EMBL:KJC05771.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
TonB-dependent receptor
L2_040_071G1_scaffold_162_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7549..8055)
DNA (507bp) protein (169aa)
G/U mismatch-specific DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; EC=3.2.2.28 {ECO:0000256|HAMAP-Rule:MF_01956};; Double-strand-specific uracil glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; Mismatch-specific uracil DNA-glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
G/U mismatch-specific DNA glycosylase n=3 Tax=Citrobacter RepID=J0VT94_9ENTR
formamidopyrimidine-DNA glycosylase
L2_040_071G1_scaffold_162_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8477..8776)
DNA (300bp) protein (100aa)
Cytoplasmic protein n=5 Tax=Citrobacter RepID=J1G4L6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67860.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_162_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8910..10724)
DNA (1815bp) protein (605aa)
Glycerol dehydratase reactivation factor large subunit n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DJN9_CITFR
Glycerol dehydratase {ECO:0000313|EMBL:KJC05768.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glycerol dehydratase
L2_040_071G1_scaffold_162_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10735..11163)
DNA (429bp) protein (143aa)
Glycerol dehydratase 16 kDa subunit n=6 Tax=Citrobacter RepID=D7R4H1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX67862.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
glycerol dehydrogenase
L2_040_071G1_scaffold_162_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11166..11750)
DNA (585bp) protein (195aa)
Glycerol dehydratase 21 kDa subunit n=7 Tax=Citrobacter RepID=D7R4H0_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX67863.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
propanediol dehydratase
L2_040_071G1_scaffold_162_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11762..13429)
DNA (1668bp) protein (556aa)
Glycerol dehydratase large subunit n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SCW3_CITFR
Glycerol dehydratase large subunit {ECO:0000313|EMBL:ETX67864.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
pduC; propanediol dehydratase
L2_040_071G1_scaffold_162_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13822..14250
DNA (429bp) protein (143aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J1G4L1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67865.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_162_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14273..15436
DNA (1164bp) protein (388aa)
1,3-propanediol dehydrogenase n=8 Tax=Citrobacter RepID=C1MBL9_9ENTR
1,3-propanediol dehydrogenase {ECO:0000313|EMBL:ADG85685.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
1,3-propanediol dehydrogenase
L2_040_071G1_scaffold_162_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15453..15806
DNA (354bp) protein (118aa)
Glycerol dehydratase reactivation factor small subunit n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DKM6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX67867.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_162_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15807..16337
DNA (531bp) protein (177aa)
Cob(I)alamin adenosyltransferase PduO {ECO:0000313|EMBL:CDL40993.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CDL40993.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSW0_CITFR
ATP--cobalamin adenosyltransferase
L2_040_071G1_scaffold_162_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16315..18240)
DNA (1926bp) protein (642aa)
DNA-binding transcriptional regulator DhaR n=3 Tax=Citrobacter RepID=K8QLU5_CITFR
Transcriptional regulator/dihydroxyacetone {ECO:0000313|EMBL:ETX67869.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_040_071G1_scaffold_162_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18332..19429)
DNA (1098bp) protein (366aa)
Glycerol dehydrogenase {ECO:0000313|EMBL:KJC10947.1}; EC=1.1.1.6 {ECO:0000313|EMBL:KJC10947.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
gldA; glycerol dehydrogenase (EC:1.1.1.6)
Glycerol dehydrogenase n=10 Tax=Enterobacteriaceae RepID=C1MBM3_9ENTR
L2_040_071G1_scaffold_162_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19991..21649
DNA (1659bp) protein (553aa)
Dihydroxyacetone kinase n=3 Tax=Citrobacter RepID=J0M0F5_9ENTR
Dihydroxyacetone kinase {ECO:0000313|EMBL:ETX67871.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
dihydroxyacetone kinase
L2_040_071G1_scaffold_162_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21739..22833)
DNA (1095bp) protein (365aa)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:KEL79387.1}; EC=2.1.1.79 {ECO:0000313|EMBL:KEL79387.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
cyclopropane fatty acyl phospholipid synthase (EC:2.1.1.79)
Cyclopropane fatty acyl phospholipid synthase n=5 Tax=Citrobacter RepID=M3DKM2_CITFR
L2_040_071G1_scaffold_162_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22961..23809
DNA (849bp) protein (283aa)
AraC family transcriptional regulator n=4 Tax=Citrobacter RepID=M3CWE1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX67873.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
AraC family transcriptional regulator
L2_040_071G1_scaffold_162_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23806..24588)
DNA (783bp) protein (261aa)
Siderophore-interacting protein n=4 Tax=Citrobacter RepID=J0VT80_9ENTR
FMN reductase {ECO:0000313|EMBL:KJC05755.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
FMN reductase
L2_040_071G1_scaffold_162_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24828..25502
DNA (675bp) protein (225aa)
Transcriptional family n=3 Tax=Citrobacter RepID=J1G4K2_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:KJC05754.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transcriptional regulator
L2_040_071G1_scaffold_162_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25556..27076)
DNA (1521bp) protein (507aa)
Aerotaxis receptor protein n=3 Tax=Citrobacter RepID=K8QWF6_CITFR
Aerotaxis receptor {ECO:0000313|EMBL:KEL79382.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
aerotaxis receptor Aer
L2_040_071G1_scaffold_162_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27444..28886
DNA (1443bp) protein (481aa)
Putrescine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01276}; EC=2.6.1.82 {ECO:0000256|HAMAP-Rule:MF_01276};; Putrescine--2-oxoglutaric acid transaminase {ECO:0000256|HAMAP-Rule:MF_01276}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
putrescine--2-oxoglutarate aminotransferase (EC:2.6.1.82)
Putrescine aminotransferase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UMT3_9ENTR
L2_040_071G1_scaffold_162_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28960..29292)
DNA (333bp) protein (111aa)
tRNA-binding protein ygjH n=6 Tax=Citrobacter RepID=J0M6Z4_9ENTR
tRNA-binding protein YgjH {ECO:0000313|EMBL:CDL41009.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
ygjH; hypothetical protein
L2_040_071G1_scaffold_162_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29502..30485
DNA (984bp) protein (328aa)
Bacterial regulatory lacI family protein n=6 Tax=Citrobacter RepID=J0VT75_9ENTR
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:KEL79377.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
DNA-binding transcriptional repressor EbgR
L2_040_071G1_scaffold_162_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30693..33785
DNA (3093bp) protein (1031aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
ebgA; cryptic beta-D-galactosidase subunit alpha (EC:3.2.1.23)
Evolved beta-galactosidase subunit alpha n=1 Tax=Citrobacter sp. KTE30 RepID=R8UNM5_9ENTR
L2_040_071G1_scaffold_162_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33782..34231
DNA (450bp) protein (150aa)
Evolved beta-galactosidase subunit beta n=5 Tax=Citrobacter RepID=J0M0E2_9ENTR
Beta-D-galactosidase {ECO:0000313|EMBL:KJC05748.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ebgC; cryptic beta-D-galactosidase subunit beta
L2_040_071G1_scaffold_162_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34298..35731
DNA (1434bp) protein (478aa)
Inner membrane transporter ygjI n=3 Tax=Citrobacter RepID=J1G497_9ENTR
Amino acid permease {ECO:0000313|EMBL:KJC10958.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ygjI; putative transporter
L2_040_071G1_scaffold_162_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35939..37000
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QSX3_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC05746.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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