ggKbase home page

L2_040_071G1_scaffold_207

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_207_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
Rubrerythrin n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8Z9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86159.1}; Flags: Fragment;; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rubrerythrin
L2_040_071G1_scaffold_207_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(318..992)
DNA (675bp) protein (225aa)
Putative RNAase regulator n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMP8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85356.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
macro domain-containing protein
L2_040_071G1_scaffold_207_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1244..2704
DNA (1461bp) protein (487aa)
Two-component sensor kinase yycG {ECO:0000313|EMBL:KJZ85320.1}; EC=2.7.3.- {ECO:0000313|EMBL:KJZ85320.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridium butyricum RepID=M8JC95_CLOBU
integral membrane sensor signal transduction histidine kinase
L2_040_071G1_scaffold_207_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2733..3431
DNA (699bp) protein (233aa)
Transcriptional regulatory protein ResD n=2 Tax=Clostridium butyricum RepID=B1QS93_CLOBU
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:EEP53284.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
srrA2; transcriptional regulatory protein SrrA
L2_040_071G1_scaffold_207_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3598..4848
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0Z1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33365.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_040_071G1_scaffold_207_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4850..6343
DNA (1494bp) protein (498aa)
Secretion protein HlyD family protein n=2 Tax=Clostridium butyricum RepID=M8JLE7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33364.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
secretion protein HlyD family protein
L2_040_071G1_scaffold_207_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6348..7085
DNA (738bp) protein (246aa)
Macrolide export ATP-binding/permease protein MacB n=2 Tax=Clostridium butyricum RepID=M8JMQ2_CLOBU
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:ETI88965.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_040_071G1_scaffold_207_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7076..8509
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMM9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33362.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
yknZ; ABC transporter permease YknZ
L2_040_071G1_scaffold_207_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8622..9332)
DNA (711bp) protein (237aa)
Helix-turn-helix-domain containing protein, AraC type n=3 Tax=Clostridium butyricum RepID=M8JBP6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85354.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
L2_040_071G1_scaffold_207_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9558..10781
DNA (1224bp) protein (408aa)
Maltose-binding periplasmic protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KFM8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33360.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein
L2_040_071G1_scaffold_207_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10813..11757
DNA (945bp) protein (315aa)
Maltose transport system permease protein MalF n=2 Tax=Clostridium butyricum RepID=B1QS87_CLOBU
Maltose/maltodextrin ABC transporter, permease protein MalF {ECO:0000313|EMBL:KJZ85345.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
maltose/maltodextrin ABC transporter permease
L2_040_071G1_scaffold_207_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11750..12658
DNA (909bp) protein (303aa)
UPI0003D5EF01 related cluster n=1 Tax=unknown RepID=UPI0003D5EF01
Maltose ABC transporter, permease protein {ECO:0000313|EMBL:ETI88960.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L2_040_071G1_scaffold_207_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12704..14428
DNA (1725bp) protein (575aa)
Neopullulanase {ECO:0000313|EMBL:EEP52963.1}; EC=3.2.1.135 {ECO:0000313|EMBL:EEP52963.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Cyclomaltodextrinase (EC:3.2.1.54)
Neopullulanase n=2 Tax=Clostridium butyricum RepID=B1QS85_CLOBU
L2_040_071G1_scaffold_207_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14631..15422
DNA (792bp) protein (264aa)
Phosphoglycolate phosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBQ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85347.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nagD2; protein NagD
L2_040_071G1_scaffold_207_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15781..16005
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS83_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85350.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_040_071G1_scaffold_207_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16455..19901
DNA (3447bp) protein (1149aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pyc; pyruvate carboxylase (EC:6.4.1.1)
Pyruvate carboxylase n=2 Tax=Clostridium butyricum RepID=M8K7E0_CLOBU
L2_040_071G1_scaffold_207_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20036..20410
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AAB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33353.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_071G1_scaffold_207_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20711..21010
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS80_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85349.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_040_071G1_scaffold_207_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21576..22523
DNA (948bp) protein (316aa)
2-dehydro-3-deoxygluconate kinase {ECO:0000313|EMBL:KJZ85326.1}; EC=2.7.1.45 {ECO:0000313|EMBL:KJZ85326.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
2-keto-3-deoxygluconate kinase n=4 Tax=Clostridium butyricum RepID=B1QS78_CLOBU
ribokinase-like domain-containing protein
L2_040_071G1_scaffold_207_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22546..23178
DNA (633bp) protein (211aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0X9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85331.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
L2_040_071G1_scaffold_207_21
unknown

Not on your lists

comp(23274..23366)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_040_071G1_scaffold_207_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23555..24106
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKP0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33349.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_071G1_scaffold_207_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24166..24597)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QS75_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33348.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_040_071G1_scaffold_207_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24911..25741
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AML6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33347.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_040_071G1_scaffold_207_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26002..26868
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0A8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97423.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional regulator
L2_040_071G1_scaffold_207_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27150..28475
DNA (1326bp) protein (442aa)
Mate efflux family protein n=2 Tax=Clostridium butyricum RepID=M8KFP4_CLOBU
MATE efflux family protein {ECO:0000313|EMBL:ENZ33345.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mate efflux family protein
L2_040_071G1_scaffold_207_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28500..29252
DNA (753bp) protein (251aa)
4-carboxymuconolactone decarboxylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7F2_CLOBU
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ97425.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein
L2_040_071G1_scaffold_207_28
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29606..31372
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002E80244
Putative uncharacterized protein {ECO:0000313|EMBL:EFI05216.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
conserved protein of unknown function [P-loop containing nucleoside triphosphate hydrolases]
L2_040_071G1_scaffold_207_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31365..32963
DNA (1599bp) protein (533aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002FB1858
hypothetical protein
L2_040_071G1_scaffold_207_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32990..34168)
DNA (1179bp) protein (393aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5G5_9CLOT
Site-specific recombinase XerD {ECO:0000313|EMBL:EKQ56202.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
phage integrase family protein
Displaying items 1-30 of 40 in total

View Taxonomy