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L2_040_071G1_scaffold_259

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_259_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..526
DNA (525bp) protein (175aa)
30S ribosomal protein S1 n=1 Tax=Escherichia coli P02997067.6 RepID=N3AQI5_ECOLX
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L2_040_071G1_scaffold_259_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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686..970
DNA (285bp) protein (95aa)
Integration host factor subunit beta n=1416 Tax=Enterobacteriaceae RepID=IHFB_ECO24
ihfB; integration host factor (IHF), DNA-binding protein, beta subunit
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L2_040_071G1_scaffold_259_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1178..3442
DNA (2265bp) protein (755aa)
Competence protein ComEC n=2 Tax=Escherichia coli RepID=L2V934_ECOLX
Competence protein ComEC {ECO:0000313|EMBL:ELC10905.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_071G1_scaffold_259_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3479..5227
DNA (1749bp) protein (583aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Lipid A export ATP-binding/permease MsbA n=2 Tax=Escherichia coli RepID=L2V5Y7_ECOLX
lipid transporter ATP-binding/permease
L2_040_071G1_scaffold_259_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5224..6210
DNA (987bp) protein (329aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
Tetraacyldisaccharide 4'-kinase n=2 Tax=Escherichia coli RepID=L2V8R7_ECOLX
lpxK; tetraacyldisaccharide 4'-kinase,Tetraacyldisaccharide 4'-kinase,tetraacyldisaccharide 4'-kinase,Tetraacyldisaccharide-1-P 4'-kinase
L2_040_071G1_scaffold_259_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6247..7479
DNA (1233bp) protein (411aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L2V6P2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELC10908.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
ycaQ; hypothetical protein
L2_040_071G1_scaffold_259_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7531..7713
DNA (183bp) protein (61aa)
UPF0434 protein YcaR n=1342 Tax=Enterobacteriaceae RepID=YCAR_ECO24
hypothetical protein
UPF0434 protein YcaR {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L2_040_071G1_scaffold_259_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7710..8456
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
3-deoxy-manno-octulosonate cytidylyltransferase n=79 Tax=Escherichia RepID=D2NGB0_ECOS5
3-deoxy-manno-octulosonate cytidylyltransferase
L2_040_071G1_scaffold_259_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8610..9503
DNA (894bp) protein (298aa)
Uncharacterized protein YcbJ n=877 Tax=Enterobacteriaceae RepID=YCBJ_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELI32156.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L2_040_071G1_scaffold_259_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9480..10259)
DNA (780bp) protein (260aa)
Uncharacterized protein YcbC n=695 Tax=cellular organisms RepID=YCBC_ECO57
hypothetical protein
Inner membrane protein {ECO:0000313|EMBL:EOU92673.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L2_040_071G1_scaffold_259_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10395..11180
DNA (786bp) protein (262aa)
Protein SmtA n=577 Tax=Enterobacteriaceae RepID=SMTA_ECOLI
putative metallothionein SmtA
Protein smtA {ECO:0000313|EMBL:EOV64211.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L2_040_071G1_scaffold_259_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11177..12499
DNA (1323bp) protein (441aa)
Chromosome partition protein MukF n=683 Tax=Enterobacteriaceae RepID=MUKF_ECO24
chromosome partition protein MukF
Chromosome partition protein MukF {ECO:0000256|HAMAP-Rule:MF_01803, ECO:0000256|SAAS:SAAS00085357}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L2_040_071G1_scaffold_259_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12480..13184
DNA (705bp) protein (235aa)
Chromosome partition protein MukE n=1 Tax=Escherichia coli KTE146 RepID=L4JBG4_ECOLX
mukE; condesin subunit E
Chromosome partition protein MukE {ECO:0000256|HAMAP-Rule:MF_01802}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L2_040_071G1_scaffold_259_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13184..17644
DNA (4461bp) protein (1487aa)
Chromosome partition protein MukB n=37 Tax=Escherichia coli RepID=MUKB_ECOLC
Chromosome partition protein MukB {ECO:0000256|HAMAP-Rule:MF_01800, ECO:0000256|SAAS:SAAS00054219}; Structural maintenance of chromosome-related protein {ECO:0000256|HAMAP-Rule:MF_01800}; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
mukB; cell division protein MukB
L2_040_071G1_scaffold_259_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17905..19752
DNA (1848bp) protein (616aa)
Predicted carboxypeptidase n=289 Tax=Enterobacteriaceae RepID=C8TM40_ECO26
ycbB; hypothetical protein
Murein L,D-transpeptidase {ECO:0000313|EMBL:EOV64215.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L2_040_071G1_scaffold_259_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19933..20481
DNA (549bp) protein (183aa)
Uncharacterized protein YcbK n=1401 Tax=Enterobacteriaceae RepID=YCBK_ECO57
ycbK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ44135.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_040_071G1_scaffold_259_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20508..21155
DNA (648bp) protein (216aa)
Uncharacterized protein YcbL n=140 Tax=Escherichia RepID=YCBL_ECOLI
hypothetical protein
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:KEO00551.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_040_071G1_scaffold_259_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21377..22567)
DNA (1191bp) protein (397aa)
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:KDY96657.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KDY96657.1};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Aspartate aminotransferase n=711 Tax=Enterobacteriaceae RepID=AAT_ECOLI
L2_040_071G1_scaffold_259_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22752..23840)
DNA (1089bp) protein (363aa)
Outer membrane protein F n=67 Tax=Escherichia coli RepID=A7ZYN2_ECOHS
ompF; outer membrane protein F
Outer membrane protein F {ECO:0000313|EMBL:EFJ95333.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
L2_040_071G1_scaffold_259_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24442..25842)
DNA (1401bp) protein (467aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
Asparagine--tRNA ligase n=1040 Tax=Enterobacteriaceae RepID=SYN_ECO24
L2_040_071G1_scaffold_259_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26011..27213)
DNA (1203bp) protein (401aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
Nicotinate phosphoribosyltransferase n=139 Tax=Escherichia RepID=PNCB_ECOBW
L2_040_071G1_scaffold_259_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27479..30091
DNA (2613bp) protein (871aa)
Membrane alanine aminopeptidase N (EC:3.4.11.2)
Membrane alanyl aminopeptidase n=17 Tax=Enterobacteriaceae RepID=D7YAK8_ECOLX
Aminopeptidase N {ECO:0000313|EMBL:ELC90789.1}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
L2_040_071G1_scaffold_259_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30134..30901)
DNA (768bp) protein (256aa)
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000256|HAMAP-Rule:MF_01724}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01724};; TaxID=1268989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907889.;"
Aliphatic sulfonates import ATP-binding protein SsuB n=5 Tax=Escherichia coli RepID=L2V948_ECOLX
ssuB; aliphatic sulfonates transport ATP-binding subunit
L2_040_071G1_scaffold_259_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30898..31692)
DNA (795bp) protein (265aa)
Aliphatic sulfonates transport permease ssuC n=27 Tax=Enterobacteriaceae RepID=H1E2P1_ECOLX
Alkanesulfonate transporter subunit {ECO:0000313|EMBL:ELC10926.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
ssuC; alkanesulfonate transporter permease
L2_040_071G1_scaffold_259_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31701..32846)
DNA (1146bp) protein (382aa)
Alkanesulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380};; FMNH2-dependent aliphatic sulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
Alkanesulfonate monooxygenase n=5 Tax=Escherichia coli RepID=D7YAK5_ECOLX
ssuD; Alkanesulfonate monooxygenase
L2_040_071G1_scaffold_259_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32843..33802)
DNA (960bp) protein (320aa)
Putative aliphatic sulfonates-binding protein n=140 Tax=Escherichia RepID=SSUA_ECOLI
aliphatic sulfonates ABC transporter substrate-binding protein
ABC transporter, substrate-binding protein, aliphatic sulfonates family {ECO:0000313|EMBL:ESE07334.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L2_040_071G1_scaffold_259_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33795..34370)
DNA (576bp) protein (192aa)
FMN reductase n=26 Tax=Escherichia coli RepID=K3JUK1_ECOLX
FMN reductase {ECO:0000313|EMBL:KEN58631.1}; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C3.;"
ssuE; NAD(P)H-dependent FMN reductase
Displaying 27 items

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