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L2_040_071G1_scaffold_273

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_273_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62..778
DNA (717bp) protein (239aa)
Uncharacterized protein n=568 Tax=Enterobacteriaceae RepID=A8ALV7_CITK8
arcA; global response regulator
Two-component response regulator {ECO:0000313|EMBL:ESB61321.1}; TaxID=1124963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Muenster str. 660.;"
L2_040_071G1_scaffold_273_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(839..2200)
DNA (1362bp) protein (454aa)
Inner membrane protein CreD n=3 Tax=Citrobacter RepID=J0VRE7_9ENTR
Inner membrane protein CreD {ECO:0000313|EMBL:ETX72071.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_273_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..3682)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Sensor protein CreC n=3 Tax=Citrobacter RepID=J0M572_9ENTR
histidine kinase
L2_040_071G1_scaffold_273_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3682..4371)
DNA (690bp) protein (230aa)
Transcriptional regulatory protein CreB n=1 Tax=Citrobacter sp. KTE30 RepID=R8UYY9_9ENTR
Transcriptional regulatory protein CreB {ECO:0000313|EMBL:ETX72069.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_040_071G1_scaffold_273_5
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4384..4857)
DNA (474bp) protein (158aa)
Protein CreA n=9 Tax=Citrobacter RepID=C1MCA9_9ENTR
Protein CreA {ECO:0000256|PIRNR:PIRNR003174}; Catabolite regulation protein A {ECO:0000256|PIRNR:PIRNR003174}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
hypothetical protein
L2_040_071G1_scaffold_273_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5069..5938
DNA (870bp) protein (290aa)
Right oriC-binding transcriptional activator n=4 Tax=Citrobacter RepID=K8R0R7_CITFR
Right origin-binding protein {ECO:0000313|EMBL:KEL79072.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
transcriptional regulator
L2_040_071G1_scaffold_273_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5935..6582)
DNA (648bp) protein (216aa)
Probable phosphoglycerate mutase GpmB {ECO:0000256|HAMAP-Rule:MF_01040, ECO:0000256|SAAS:SAAS00013984}; EC=5.4.2.- {ECO:0000256|HAMAP-Rule:MF_01040};; PGAM {ECO:0000256|HAMAP-Rule:MF_01040}; Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01040}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Probable phosphoglycerate mutase GpmB n=8 Tax=Citrobacter RepID=C1MCA7_9ENTR
phosphoglycerate mutase
L2_040_071G1_scaffold_273_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6635..7150
DNA (516bp) protein (172aa)
Non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; Non-standard purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; Nucleoside-triphosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Non-canonical purine NTP phosphatase n=4 Tax=Citrobacter RepID=J0M576_9ENTR
yjjX; inositol monophosphatase
L2_040_071G1_scaffold_273_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7206..7502)
DNA (297bp) protein (99aa)
Trp operon repressor n=5 Tax=Citrobacter RepID=K8QSN0_CITFR
Trp operon repressor
Trp operon repressor {ECO:0000256|HAMAP-Rule:MF_00475, ECO:0000256|SAAS:SAAS00234182}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_040_071G1_scaffold_273_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7622..9559)
DNA (1938bp) protein (646aa)
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:CDL38736.1}; EC=3.2.1.- {ECO:0000313|EMBL:CDL38736.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Lytic Murein transglycosylase n=4 Tax=Citrobacter RepID=J0LYR8_9ENTR
lytic murein transglycosylase
L2_040_071G1_scaffold_273_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9891..11558
DNA (1668bp) protein (556aa)
Family atp-binding cassette protein n=5 Tax=Citrobacter RepID=J1G2W1_9ENTR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDL38735.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
ABC transporter ATP-binding protein
L2_040_071G1_scaffold_273_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11658..12887)
DNA (1230bp) protein (410aa)
NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family / Ribosylnicotinamide kinase {ECO:0000313|EMBL:CDL38734.1}; EC=2.7.1.22 {ECO:0000313|EMBL:CDL38734.1};; EC=2.7.7.1 {ECO:0000313|EMBL:CDL38734.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase n=6 Tax=Citrobacter RepID=J0VRF9_9ENTR
L2_040_071G1_scaffold_273_13
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12976..14358)
DNA (1383bp) protein (461aa)
DNA repair protein radA n=6 Tax=Enterobacteriaceae RepID=I6HB97_SHIFL
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
DNA repair protein RadA
L2_040_071G1_scaffold_273_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14370..15338)
DNA (969bp) protein (323aa)
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:KEL79064.1}; EC=3.1.3.3 {ECO:0000313|EMBL:KEL79064.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
serB; phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase n=6 Tax=Citrobacter RepID=J1G2Q3_9ENTR
L2_040_071G1_scaffold_273_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15454..16095
DNA (642bp) protein (214aa)
Lipoate-protein ligase A, N-ter subunit n=4 Tax=Citrobacter RepID=J0LYS2_9ENTR
Protein smp {ECO:0000313|EMBL:ETX72058.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_273_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16132..17148
DNA (1017bp) protein (339aa)
Lipoate-protein ligase A {ECO:0000256|HAMAP-Rule:MF_01602, ECO:0000256|SAAS:SAAS00214764}; EC=2.7.7.63 {ECO:0000256|HAMAP-Rule:MF_01602, ECO:0000256|SAAS:SAAS00026637};; Lipoate--protein ligase {ECO:0000256|HAMAP-Rule:MF_01602}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Lipoate-protein ligase A n=5 Tax=Citrobacter RepID=J1G2W4_9ENTR
lplA; lipoate-protein ligase A
L2_040_071G1_scaffold_273_17
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17299..18018)
DNA (720bp) protein (240aa)
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=149539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enteritidis.;"
Purine nucleoside phosphorylase DeoD-type n=350 Tax=Enterobacteriaceae RepID=DEOD_SALA4
L2_040_071G1_scaffold_273_18
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18122..19345)
DNA (1224bp) protein (408aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
Phosphopentomutase n=9 Tax=Enterobacteriaceae RepID=C1MC96_9ENTR
phosphopentomutase
L2_040_071G1_scaffold_273_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19397..20719)
DNA (1323bp) protein (441aa)
Thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031985};; TdRPase {ECO:0000256|HAMAP-Rule:MF_01628}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Thymidine phosphorylase n=3 Tax=Citrobacter RepID=J1G2Q7_9ENTR
thymidine phosphorylase
L2_040_071G1_scaffold_273_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20832..21611)
DNA (780bp) protein (260aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00592};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00592}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Deoxyribose-phosphate aldolase n=8 Tax=Citrobacter RepID=C1MC94_9ENTR
L2_040_071G1_scaffold_273_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21873..23423
DNA (1551bp) protein (517aa)
YjjI family glycine radical enzyme n=3 Tax=Citrobacter RepID=J1G2W8_9ENTR
YjjI family glycine radical enzyme {ECO:0000313|EMBL:ETX72052.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_273_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23395..24258
DNA (864bp) protein (288aa)
Family glycine radical enzyme activase n=3 Tax=Citrobacter RepID=J0VRH0_9ENTR
YjjW family glycine radical enzyme activase {ECO:0000313|EMBL:ETX72051.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_273_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24295..25071)
DNA (777bp) protein (259aa)
Family hydrolase n=5 Tax=Citrobacter RepID=J0M586_9ENTR
Deoxyribonuclease YjjV {ECO:0000313|EMBL:KJC07643.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
deoxyribonuclease YjjV
L2_040_071G1_scaffold_273_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25068..26141)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QSL5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC13582.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_071G1_scaffold_273_25
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26263..26424)
DNA (162bp) protein (54aa)
UPF0391 membrane protein WEU_00389 n=2 Tax=Citrobacter RepID=R8VJX2_9ENTR
hypothetical protein
UPF0391 membrane protein ytjA {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_071G1_scaffold_273_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26552..27169)
DNA (618bp) protein (206aa)
Osmotically-inducible protein Y n=3 Tax=Citrobacter RepID=J1G2X2_9ENTR
Osmotically-inducible protein Y {ECO:0000313|EMBL:ETX72047.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_273_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27478..29067)
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=6 Tax=Citrobacter RepID=J0VRH5_9ENTR
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
prfC; peptide chain release factor 3
L2_040_071G1_scaffold_273_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29160..29840)
DNA (681bp) protein (227aa)
dUMP phosphatase (EC:3.1.3.5)
Nucleotidase n=6 Tax=Citrobacter RepID=J0M591_9ENTR
Pyrimidine 5'-nucleotidase YjjG {ECO:0000313|EMBL:ETX72045.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_071G1_scaffold_273_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29855..30301)
DNA (447bp) protein (149aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:KJC13586.1}; EC=2.3.1.128 {ECO:0000313|EMBL:KJC13586.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=5 Tax=Citrobacter RepID=J1G2R6_9ENTR
L2_040_071G1_scaffold_273_30
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30270..30683)
DNA (414bp) protein (138aa)
DNA polymerase III subunit psi n=5 Tax=Citrobacter RepID=K8QUE8_CITFR
DNA polymerase III subunit psi {ECO:0000256|PIRNR:PIRNR029225}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
DNA polymerase III subunit psi
Displaying items 1-30 of 33 in total

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