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L2_040_071G1_scaffold_323

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_323_1
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(131..1081)
DNA (951bp) protein (317aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
tRNA dimethylallyltransferase n=511 Tax=Enterobacteriaceae RepID=MIAA_ECO24
L2_040_071G1_scaffold_323_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1074..2921)
DNA (1848bp) protein (616aa)
DNA mismatch repair protein MutL n=134 Tax=Escherichia RepID=MUTL_ECOBW
mutL; MutL, subunit of MutHLS complex, methyl-directed mismatch repair
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
L2_040_071G1_scaffold_323_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2931..4268)
DNA (1338bp) protein (446aa)
amiB; N-acetylmuramoyl-L-alanine amidase 2 (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase AmiB n=2 Tax=Escherichia coli RepID=L2VBR1_ECOLX
N-acetylmuramoyl-L-alanine amidase AmiB {ECO:0000313|EMBL:ESJ99979.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L2_040_071G1_scaffold_323_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4287..4748)
DNA (462bp) protein (154aa)
ATPase n=2 Tax=Escherichia coli RepID=L2VES1_ECOLX
ATPase {ECO:0000313|EMBL:ESJ99980.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hypothetical protein
L2_040_071G1_scaffold_323_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4720..6252)
DNA (1533bp) protein (511aa)
Bifunctional NAD(P)H-hydrate repair enzyme Nnr n=178 Tax=Escherichia RepID=NNR_ECOLI
carbohydrate kinase
YjeF family domain-containing protein {ECO:0000313|EMBL:ESJ99981.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L2_040_071G1_scaffold_323_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6266..7405
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Epoxyqueuosine reductase n=420 Tax=Enterobacteriaceae RepID=QUEG_ECOLI
iron-sulfur cluster binding protein
L2_040_071G1_scaffold_323_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8305..8850)
DNA (546bp) protein (182aa)
orn; oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
Oligoribonuclease n=4 Tax=Escherichia RepID=F0JNX5_ESCFE
L2_040_071G1_scaffold_323_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8945..9997
DNA (1053bp) protein (351aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
Putative ribosome biogenesis GTPase RsgA n=647 Tax=Enterobacteriaceae RepID=RSGA_ECO24
ribosome-associated GTPase
L2_040_071G1_scaffold_323_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10094..11062
DNA (969bp) protein (323aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
Phosphatidylserine decarboxylase proenzyme n=1024 Tax=Enterobacteriaceae RepID=PSD_ECO24
L2_040_071G1_scaffold_323_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11084..14407
DNA (3324bp) protein (1108aa)
Potassium efflux system protein KefA n=1 Tax=Escherichia coli KOEGE 7 (16a) RepID=U0APD4_ECOLX
yjeP; putative mechanosensitive channel protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EHU21033.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L2_040_071G1_scaffold_323_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14436..14738)
DNA (303bp) protein (101aa)
Inner membrane protein YjeO n=225 Tax=Enterobacteriaceae RepID=YJEO_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS76422.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
L2_040_071G1_scaffold_323_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14747..15061)
DNA (315bp) protein (105aa)
Uncharacterized protein YjeN n=244 Tax=Enterobacteriaceae RepID=YJEN_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY08610.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L2_040_071G1_scaffold_323_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15113..16615)
DNA (1503bp) protein (501aa)
Amino acid permease n=9 Tax=Escherichia coli RepID=V0X8K2_ECOLX
Amino acid permease {ECO:0000313|EMBL:ESD64951.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
amino acid permease-associated protein
L2_040_071G1_scaffold_323_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16834..17811)
DNA (978bp) protein (326aa)
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00174, ECO:0000256|SAAS:SAAS00088906}; Short=EF-P--(R)-beta-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00174};; EC=6.3.1.- {ECO:0000256|HAMAP-Rule:MF_00174, ECO:0000256|SAAS:SAAS00088909};; EF-P post-translational modification enzyme A {ECO:0000256|HAMAP-Rule:MF_00174}; EF-P-lysine lysyltransferase {ECO:0000256|HAMAP-Rule:MF_00174}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
Elongation factor P--(R)-beta-lysine ligase n=14 Tax=Enterobacteriaceae RepID=C3SGA2_ECOLX
genX; lysyl-tRNA synthetase-like protein GenX
L2_040_071G1_scaffold_323_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18136..19944
DNA (1809bp) protein (603aa)
fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Fumarate reductase flavoprotein subunit {ECO:0000256|RuleBase:RU362050}; EC=1.3.5.4 {ECO:0000256|RuleBase:RU362050};; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
Fumarate reductase flavoprotein subunit n=596 Tax=Enterobacteriaceae RepID=FRDA_ECOLI
L2_040_071G1_scaffold_323_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19937..20671
DNA (735bp) protein (245aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
fumarate reductase iron-sulfur subunit n=1 Tax=Escherichia coli RepID=UPI00037D1C34
fumarate reductase, iron-sulfur subunit
L2_040_071G1_scaffold_323_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20682..21077
DNA (396bp) protein (132aa)
Fumarate reductase subunit C n=1251 Tax=Bacteria RepID=FRDC_ECO24
frdC; fumarate reductase subunit C
Fumarate reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00708, ECO:0000256|SAAS:SAAS00095967}; Fumarate reductase 15 kDa hydrophobic protein {ECO:0000256|HAMAP-Rule:MF_00708}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L2_040_071G1_scaffold_323_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21088..21447
DNA (360bp) protein (120aa)
Fumarate reductase subunit D n=991 Tax=Bacteria RepID=FRDD_ECO27
frdD; fumarate reductase, D subunit
Fumarate reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00709, ECO:0000256|SAAS:SAAS00096033}; Fumarate reductase 13 kDa hydrophobic protein {ECO:0000256|HAMAP-Rule:MF_00709}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L2_040_071G1_scaffold_323_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21510..22643
DNA (1134bp) protein (378aa)
ampC; beta-lactamase/D-alanine carboxypeptidase (EC:3.5.2.6)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
Beta-lactamase n=50 Tax=Escherichia RepID=B2N211_ECOLX
L2_040_071G1_scaffold_323_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22732..23265
DNA (534bp) protein (178aa)
Outer membrane lipoprotein blc n=2 Tax=Escherichia coli RepID=L2VDK2_ECOLX
outer membrane lipoprotein
Outer membrane lipoprotein blc {ECO:0000313|EMBL:ESJ99734.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L2_040_071G1_scaffold_323_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23262..23579)
DNA (318bp) protein (106aa)
Quaternary ammonium compound-resistance protein SugE n=1064 Tax=Enterobacteriaceae RepID=SUGE_ECO57
suppresser of groEL
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EFJ85752.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_040_071G1_scaffold_323_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23761..23907)
DNA (147bp) protein (49aa)
Entericidin B n=1424 Tax=Enterobacteriaceae RepID=ECNB_ECO57
ecnB; entericidin B membrane lipoprotein
Entericidin B {ECO:0000313|EMBL:EII21457.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L2_040_071G1_scaffold_323_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24018..24143)
DNA (126bp) protein (42aa)
Entericidin A n=1168 Tax=Enterobacteriaceae RepID=ECNA_ECO57
entericidin protein A
Entericidin EcnA/B family protein {ECO:0000313|EMBL:KEJ49991.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L2_040_071G1_scaffold_323_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24195..24761)
DNA (567bp) protein (189aa)
Elongation factor P n=1429 Tax=Enterobacteriaceae RepID=EFP_ECO24
efp; elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L2_040_071G1_scaffold_323_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24803..25831
DNA (1029bp) protein (343aa)
KamA family protein n=68 Tax=Enterobacteriaceae RepID=B2TY22_SHIB3
radical SAM superfamily protein
Lysine-2,3-aminomutase-like protein {ECO:0000313|EMBL:EOW30382.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L2_040_071G1_scaffold_323_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26226..27095
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L2VCG2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESJ99740.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hypothetical protein
L2_040_071G1_scaffold_323_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27288..27641)
DNA (354bp) protein (118aa)
Lipoprotein n=2 Tax=Escherichia coli RepID=D6IIW0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ42940.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L2_040_071G1_scaffold_323_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27779..28807)
DNA (1029bp) protein (343aa)
60 kDa chaperonin n=1 Tax=Escherichia coli 2866450 RepID=M8UEA2_ECOLX
groL; chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Displaying 28 items

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