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L2_040_071G1_scaffold_334

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_334_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(66..938)
DNA (873bp) protein (291aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
tRNA-dihydrouridine synthase n=9 Tax=Citrobacter RepID=K8QZN5_CITFR
tRNA-dihydrouridine synthase B
L2_040_071G1_scaffold_334_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1392..2273)
DNA (882bp) protein (294aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=2 Tax=Citrobacter freundii RepID=K8QVX0_CITFR
L2_040_071G1_scaffold_334_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2285..3736)
DNA (1452bp) protein (484aa)
Sodium/pantothenate symporter n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QPS7_CITFR
Sodium/panthothenate symporter {ECO:0000313|EMBL:KJC04420.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
panF; sodium/panthothenate symporter
L2_040_071G1_scaffold_334_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3726..3968)
DNA (243bp) protein (81aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=K8QMM5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL78024.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_040_071G1_scaffold_334_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4076..5425)
DNA (1350bp) protein (450aa)
acetyl-CoA carboxylase (EC:6.4.1.2)
Acetyl CoA carboxylase n=6 Tax=Citrobacter RepID=J0VUQ7_9ENTR
Biotin carboxylase {ECO:0000313|EMBL:ETX68041.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_071G1_scaffold_334_6
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5436..5906)
DNA (471bp) protein (157aa)
acetyl-CoA carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=11 Tax=Citrobacter RepID=C1MA55_9ENTR
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:GAL45941.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_071G1_scaffold_334_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6213..6812)
DNA (600bp) protein (200aa)
Sulfoxide reductase heme-binding subunit YedZ n=1 Tax=Citrobacter sp. KTE30 RepID=R8UP16_9ENTR
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
sulfite oxidase subunit YedZ
L2_040_071G1_scaffold_334_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6813..7478)
DNA (666bp) protein (222aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HS40_CITFR
TMAO/DMSO reductase
L2_040_071G1_scaffold_334_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7496..7804)
DNA (309bp) protein (103aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
Sulfoxide reductase catalytic subunit YedY n=3 Tax=Citrobacter RepID=C1MA53_9ENTR
TMAO/DMSO reductase
L2_040_071G1_scaffold_334_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7924..8898)
DNA (975bp) protein (325aa)
Quinone oxidoreductase n=3 Tax=Citrobacter RepID=K8ZQ87_9ENTR
Putative quinone oxidoreductase YhdH {ECO:0000313|EMBL:KEL78030.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
quinone oxidoreductase
L2_040_071G1_scaffold_334_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9124..11064
DNA (1941bp) protein (647aa)
RNase E specificity factor CsrD n=3 Tax=Citrobacter RepID=J1G623_9ENTR
RNase E specificity factor CsrD {ECO:0000313|EMBL:KEL78031.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
regulatory protein CsrD
L2_040_071G1_scaffold_334_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11371..12414
DNA (1044bp) protein (348aa)
Regulator of ftsI n=18 Tax=Enterobacteriaceae RepID=C3SRN8_ECOLX
rod shape-determining protein MreB
Rod shape-determining protein mreB {ECO:0000313|EMBL:EQN24357.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_040_071G1_scaffold_334_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..13503
DNA (1023bp) protein (341aa)
Cell shape-determining protein MreC n=4 Tax=Citrobacter RepID=J1G5U0_9ENTR
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
rod shape-determining protein MreC
L2_040_071G1_scaffold_334_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13504..13992
DNA (489bp) protein (163aa)
Rod shape-determining protein mreD n=10 Tax=Citrobacter RepID=C1MA47_9ENTR
Rod shape-determining protein MreD {ECO:0000313|EMBL:KKC64334.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
rod shape-determining protein MreD
L2_040_071G1_scaffold_334_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14000..14593
DNA (594bp) protein (198aa)
Maf-like protein D186_15099 n=3 Tax=Citrobacter RepID=K8QMN4_CITFR
Maf-like protein TN42_15200 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
septum formation inhibitor Maf
L2_040_071G1_scaffold_334_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14583..16052
DNA (1470bp) protein (490aa)
Ribonuclease G n=7 Tax=Citrobacter RepID=C1MA45_9ENTR
Ribonuclease G {ECO:0000313|EMBL:KDF11528.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
ribonuclease G
L2_040_071G1_scaffold_334_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16164..19979
DNA (3816bp) protein (1272aa)
TIGR02099 family protein n=3 Tax=Citrobacter RepID=J0M1X0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX68030.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_334_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20141..21586
DNA (1446bp) protein (482aa)
Protein tldD n=7 Tax=Citrobacter RepID=C1MA43_9ENTR
Protease TldD {ECO:0000313|EMBL:KJC04440.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tldD; protease TldD
L2_040_071G1_scaffold_334_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21673..22602)
DNA (930bp) protein (310aa)
HTH-type transcriptional activator AaeR n=5 Tax=Citrobacter RepID=J0M8M8_9ENTR
HTH-type transcriptional activator AaeR {ECO:0000313|EMBL:ETX68028.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_040_071G1_scaffold_334_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22787..22990
DNA (204bp) protein (68aa)
Protein AaeX n=10 Tax=Enterobacteriaceae RepID=D4BK32_9ENTR
transporter
Protein AaeX {ECO:0000256|HAMAP-Rule:MF_01546, ECO:0000256|SAAS:SAAS00052271}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
L2_040_071G1_scaffold_334_21
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22998..23930
DNA (933bp) protein (311aa)
p-hydroxybenzoic acid efflux pump subunit AaeA n=6 Tax=Citrobacter RepID=J1G614_9ENTR
p-hydroxybenzoic acid efflux pump subunit AaeA {ECO:0000256|HAMAP-Rule:MF_01544, ECO:0000256|SAAS:SAAS00016406}; Short=pHBA efflux pump protein A {ECO:0000256|HAMAP-Rule:MF_01544};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
p-hydroxybenzoic acid efflux subunit AaeA
L2_040_071G1_scaffold_334_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23936..25903
DNA (1968bp) protein (656aa)
p-hydroxybenzoic acid efflux pump subunit AaeB n=4 Tax=Citrobacter RepID=J0M1W5_9ENTR
p-hydroxybenzoic acid efflux pump subunit AaeB {ECO:0000256|HAMAP-Rule:MF_01545, ECO:0000256|SAAS:SAAS00166132}; Short=pHBA efflux pump protein B {ECO:0000256|HAMAP-Rule:MF_01545};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
p-hydroxybenzoic acid efflux subunit AaeB
L2_040_071G1_scaffold_334_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26023..26301
DNA (279bp) protein (93aa)
Cytoplasmic protein n=7 Tax=Citrobacter RepID=J1G5T1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04402.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_071G1_scaffold_334_24
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26359..26625)
DNA (267bp) protein (89aa)
Uncharacterized protein n=9 Tax=Citrobacter RepID=D4BK36_9ENTR
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOQ46048.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
L2_040_071G1_scaffold_334_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27002..27472)
DNA (471bp) protein (157aa)
Arginine repressor n=12 Tax=Enterobacteriaceae RepID=C1MA36_9ENTR
arginine repressor
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_040_071G1_scaffold_334_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27909..28844
DNA (936bp) protein (312aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01516, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01516, ECO:0000256|RuleBase:RU000422};; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase n=9 Tax=Citrobacter RepID=J1G609_9ENTR
L2_040_071G1_scaffold_334_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28901..29968)
DNA (1068bp) protein (356aa)
Protease degS n=9 Tax=Citrobacter RepID=G9SDA7_CITFR
Protease degS {ECO:0000313|EMBL:KDF11516.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
serine endoprotease
L2_040_071G1_scaffold_334_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30058..31425)
DNA (1368bp) protein (456aa)
Protease degQ n=6 Tax=Citrobacter RepID=J1G5S6_9ENTR
Protease degQ {ECO:0000313|EMBL:ETX68019.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
serine endoprotease DegQ
L2_040_071G1_scaffold_334_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31594..31992)
DNA (399bp) protein (133aa)
Uncharacterized protein n=10 Tax=Citrobacter RepID=K8QPU8_CITFR
hypothetical protein
Cytochrome d ubiquinol oxidase subunit III {ECO:0000313|EMBL:ETX68018.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_071G1_scaffold_334_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32185..33312
DNA (1128bp) protein (376aa)
Afg1 family n=5 Tax=Citrobacter RepID=J0VUN4_9ENTR
Cell division protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; Z ring-associated protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
Displaying 30 items

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