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L2_040_071G1_scaffold_372

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_372_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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593..1042
DNA (450bp) protein (150aa)
Glutamate mutase sigma subunit {ECO:0000256|HAMAP-Rule:MF_00526}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_00526};; Glutamate mutase S chain {ECO:0000256|HAMAP-Rule:MF_00526}; Glutamate mutase small subunit {ECO:0000256|HAMAP-Rule:MF_00526}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_00526}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
Methylaspartate mutase S chain n=8 Tax=Citrobacter RepID=C1M934_9ENTR
methylaspartate mutase
L2_040_071G1_scaffold_372_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1042..2430
DNA (1389bp) protein (463aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QVE7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL77504.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
glutamate mutase
L2_040_071G1_scaffold_372_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2449..3894
DNA (1446bp) protein (482aa)
Glutamate mutase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_01923}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01923};; Glutamate mutase E chain {ECO:0000256|HAMAP-Rule:MF_01923}; Glutamate mutase large subunit {ECO:0000256|HAMAP-Rule:MF_01923}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_01923}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Methylaspartate e subunit n=6 Tax=Citrobacter RepID=J0VVC3_9ENTR
glutamate mutase
L2_040_071G1_scaffold_372_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3894..5135
DNA (1242bp) protein (414aa)
Methylaspartate ammonia-lyase n=6 Tax=Citrobacter RepID=J1G6P0_9ENTR
Methylaspartate ammonia-lyase {ECO:0000313|EMBL:KJC10853.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
methylaspartate ammonia-lyase
L2_040_071G1_scaffold_372_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5139..6509
DNA (1371bp) protein (457aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=C1M930_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL77507.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
3-methylaspartate ammonia-lyase
L2_040_071G1_scaffold_372_6
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6506..6823
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J1G6H8_9ENTR
acyl-CoA synthetase
Uncharacterized protein {ECO:0000313|EMBL:GAL44836.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_071G1_scaffold_372_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6992..8296
DNA (1305bp) protein (435aa)
Proton sodium-glutamate symport protein n=5 Tax=Citrobacter RepID=J0M9E3_9ENTR
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJC08354.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
C4-dicarboxylate ABC transporter
L2_040_071G1_scaffold_372_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8422..9423
DNA (1002bp) protein (334aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
glutaminase (EC:3.5.1.2)
Glutaminase n=5 Tax=Citrobacter RepID=J0VVC1_9ENTR
L2_040_071G1_scaffold_372_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9484..11136
DNA (1653bp) protein (551aa)
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type n=4 Tax=Citrobacter RepID=J1G6N4_9ENTR
Fumarate hydratase {ECO:0000313|EMBL:ETX72786.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
fumarate hydratase
L2_040_071G1_scaffold_372_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11146..11748
DNA (603bp) protein (201aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:KEL77512.1}; EC=2.5.1.17 {ECO:0000313|EMBL:KEL77512.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=3 Tax=Citrobacter RepID=J0M2M5_9ENTR
L2_040_071G1_scaffold_372_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11831..12733)
DNA (903bp) protein (301aa)
Glycine cleavage system transcriptional activator n=6 Tax=Citrobacter RepID=J1G6H5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX65244.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
LysR family transcriptional regulator
L2_040_071G1_scaffold_372_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13139..13927
DNA (789bp) protein (263aa)
Uroporphyrin-III methyltransferase {ECO:0000313|EMBL:KJC10845.1}; EC=2.1.1.107 {ECO:0000313|EMBL:KJC10845.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
uroporphyrin-III methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=2 Tax=Citrobacter freundii RepID=K8QVF7_CITFR
L2_040_071G1_scaffold_372_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13906..14796)
DNA (891bp) protein (297aa)
Transcriptional regulator n=3 Tax=Citrobacter RepID=J0VVB8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72782.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L2_040_071G1_scaffold_372_14
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15022..15891)
DNA (870bp) protein (290aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=11 Tax=Citrobacter RepID=C1M913_9ENTR
L2_040_071G1_scaffold_372_15
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15891..17057)
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=11 Tax=Enterobacteriaceae RepID=C1M912_9ENTR
L2_040_071G1_scaffold_372_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17148..18371)
DNA (1224bp) protein (408aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoamide acetyltransferase n=8 Tax=Citrobacter RepID=J1G6H2_9ENTR
L2_040_071G1_scaffold_372_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18386..21187)
DNA (2802bp) protein (934aa)
Alpha-ketoglutarate decarboxylase n=5 Tax=Citrobacter RepID=J0M9D3_9ENTR
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:KJC08364.1}; 2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:BAO18614.1}; Flags: Fragment;; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
2-oxoglutarate dehydrogenase
L2_040_071G1_scaffold_372_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21445..22161)
DNA (717bp) protein (239aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Shigella flexneri 1235-66 RepID=I6HDR5_SHIFL
sdhB; succinate dehydrogenase
L2_040_071G1_scaffold_372_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22177..23943)
DNA (1767bp) protein (589aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Succinate dehydrogenase flavoprotein subunit n=8 Tax=Citrobacter RepID=J1G6M5_9ENTR
sdhA; succinate dehydrogenase
L2_040_071G1_scaffold_372_20
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23943..24290)
DNA (348bp) protein (116aa)
sdhD; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase, hydrophobic membrane anchor protein n=4 Tax=Enterobacteriaceae RepID=D4BC99_9ENTR
Succinate dehydrogenase hydrophobic membrane anchor subunit {ECO:0000313|EMBL:GAL44850.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_071G1_scaffold_372_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24284..24559)
DNA (276bp) protein (92aa)
sdhC; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase cytochrome b556 subunit n=8 Tax=Citrobacter RepID=C1M906_9ENTR
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:KEL77523.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_040_071G1_scaffold_372_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25334..26617
DNA (1284bp) protein (428aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
gltA; type II citrate synthase (EC:2.3.3.1)
Citrate synthase n=3 Tax=Citrobacter RepID=J0M9C8_9ENTR
L2_040_071G1_scaffold_372_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26793..27839
DNA (1047bp) protein (349aa)
Protein AbrB n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZ69_9ENTR
Protein AbrB {ECO:0000313|EMBL:ETX72772.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
AbrB family transcriptional regulator
L2_040_071G1_scaffold_372_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27836..28627)
DNA (792bp) protein (264aa)
Endonuclease 8 n=1 Tax=Citrobacter sp. KTE30 RepID=R8V3K0_9ENTR
Endonuclease 8 {ECO:0000256|HAMAP-Rule:MF_01253}; DNA glycosylase/AP lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; DNA-(apurinic or apyrimidinic site) lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; Endonuclease VIII {ECO:0000256|HAMAP-Rule:MF_01253}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
endonuclease VIII
L2_040_071G1_scaffold_372_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28642..29286)
DNA (645bp) protein (215aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Pyrrolidone-carboxylate peptidase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZZ4_9ENTR
pyrrolidone-carboxylate peptidase
L2_040_071G1_scaffold_372_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29296..30291)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3C9J6_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL77532.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein
L2_040_071G1_scaffold_372_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30288..31010)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QVH8_CITFR
Membrane protein {ECO:0000313|EMBL:KJC10828.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L2_040_071G1_scaffold_372_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31064..31798)
DNA (735bp) protein (245aa)
UPF0271 protein D186_00195 n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R7H2_CITFR
UPF0271 protein YbgL {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
LamB/YcsF family protein
L2_040_071G1_scaffold_372_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31788..32720)
DNA (933bp) protein (311aa)
Urea amidolyase-related protein n=4 Tax=Citrobacter RepID=J1G6L6_9ENTR
Urea amidolyase {ECO:0000313|EMBL:ETX72766.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_372_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32714..33370)
DNA (657bp) protein (219aa)
Allophanate hydrolase 2 subunit 1 {ECO:0000313|EMBL:CDL38098.1}; EC=3.5.1.54 {ECO:0000313|EMBL:CDL38098.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Allophanate hydrolase n=3 Tax=Citrobacter RepID=J0M2L0_9ENTR
hypothetical protein
Displaying items 1-30 of 33 in total

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