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L2_040_071G1_scaffold_379

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_379_1
unknown

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comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

L2_040_071G1_scaffold_379_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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394..1584
DNA (1191bp) protein (397aa)
bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 (EC:1.14.12.17)
Flavohemoprotein n=460 Tax=cellular organisms RepID=HMP_ECOLI
Flavohemoprotein {ECO:0000256|HAMAP-Rule:MF_01252}; Flavohemoglobin {ECO:0000256|HAMAP-Rule:MF_01252}; Hemoglobin-like protein {ECO:0000256|HAMAP-Rule:MF_01252}; Nitric oxide dioxygenase {ECO:0000256|HAMAP-Rule:MF_01252}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C3.;"
L2_040_071G1_scaffold_379_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1629..1967)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II 1 n=1938 Tax=Enterobacteriaceae RepID=GLNB_ECO57
nitrogen regulatory protein P-II 1
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:ENA06885.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
L2_040_071G1_scaffold_379_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2028..3362)
DNA (1335bp) protein (445aa)
Transcriptional regulatory protein GlrR n=427 Tax=Enterobacteriaceae RepID=GLRR_ECOLI
sigma-54 dependent response regulator
AAA domain family protein {ECO:0000313|EMBL:KEN89558.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L2_040_071G1_scaffold_379_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3352..4065)
DNA (714bp) protein (238aa)
Quorum-sensing regulator protein G n=368 Tax=Enterobacteriaceae RepID=QSEG_ECO57
yfhG; hypothetical protein
YfhG lipofamily protein {ECO:0000313|EMBL:KDZ36130.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L2_040_071G1_scaffold_379_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4230..5612)
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Histidine kinase n=65 Tax=Escherichia RepID=C9QPL7_ECOD1
integral membrane sensor signal transduction histidine kinase
L2_040_071G1_scaffold_379_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6215..10102)
DNA (3888bp) protein (1296aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Escherichia coli RepID=L2UWX6_ECOLX
L2_040_071G1_scaffold_379_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10360..11916
DNA (1557bp) protein (519aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00176609}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00166192};; Murein lyase F {ECO:0000256|HAMAP-Rule:MF_02016}; Flags: Precursor;; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
Membrane-bound lytic murein transglycosylase F n=541 Tax=Enterobacteriaceae RepID=MLTF_ECODH
lytic transglycosylase
L2_040_071G1_scaffold_379_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11913..12416)
DNA (504bp) protein (168aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.7.;"
tRNA-specific adenosine deaminase n=444 Tax=Enterobacteriaceae RepID=TADA_ECOLI
CMP/dCMP deaminase zinc-binding protein
L2_040_071G1_scaffold_379_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12474..13109)
DNA (636bp) protein (212aa)
Phosphatidylglycerophosphatase C n=468 Tax=Enterobacteriaceae RepID=PGPC_ECOLI
yfhB; hypothetical protein
HAD hydrolase, family IF {ECO:0000313|EMBL:EOV77455.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_071G1_scaffold_379_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13318..14166
DNA (849bp) protein (283aa)
Uncharacterized HTH-type transcriptional regulator YfhH n=848 Tax=Enterobacteriaceae RepID=YFHH_ECOLI
yfhH; hypothetical protein
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:END91045.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L2_040_071G1_scaffold_379_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14222..14482
DNA (261bp) protein (87aa)
4Fe-4S binding domain protein n=422 Tax=Enterobacteriaceae RepID=B1LP75_ECOSM
hypothetical protein
4Fe-4S cluster-containing protein {ECO:0000313|EMBL:ETY42663.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
L2_040_071G1_scaffold_379_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15178..15558)
DNA (381bp) protein (127aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
Holo-[acyl-carrier-protein] synthase n=226 Tax=Enterobacteriaceae RepID=ACPS_ECO57
acpS; 4'-phosphopantetheinyl transferase
L2_040_071G1_scaffold_379_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15558..16289)
DNA (732bp) protein (244aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
Pyridoxine 5'-phosphate synthase n=729 Tax=Escherichia RepID=PDXJ_ECO57
pdxJ; pyridoxine 5'-phosphate synthase
L2_040_071G1_scaffold_379_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16301..17029)
DNA (729bp) protein (243aa)
DNA repair protein RecO n=768 Tax=Bacteria RepID=RECO_ECO45
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
L2_040_071G1_scaffold_379_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17041..17946)
DNA (906bp) protein (302aa)
GTPase Era n=258 Tax=Enterobacteriaceae RepID=ERA_ECOBW
GTP-binding protein era-like protein
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1248823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H28 str. RM12581.;"
L2_040_071G1_scaffold_379_17
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17943..18623)
DNA (681bp) protein (227aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
Ribonuclease 3 n=1213 Tax=Enterobacteriaceae RepID=RNC_ECO24
L2_040_071G1_scaffold_379_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18895..19869)
DNA (975bp) protein (325aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
Signal peptidase I n=161 Tax=Enterobacteriaceae RepID=LEP_ECOLI
lepB; signal peptidase I
L2_040_071G1_scaffold_379_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19885..21684)
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
Elongation factor 4 n=1105 Tax=Enterobacteriaceae RepID=LEPA_ECO24
lepA; GTP-binding protein LepA
L2_040_071G1_scaffold_379_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21882..22361)
DNA (480bp) protein (160aa)
Protein RseC n=241 Tax=Escherichia RepID=RSEC_ECOLI
rseC; SoxR reducing system protein RseC
Sigma-E factor regulatory protein RseC {ECO:0000313|EMBL:EFU36565.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L2_040_071G1_scaffold_379_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22358..23314)
DNA (957bp) protein (319aa)
Sigma-E factor regulatory protein RseB n=890 Tax=Bacteria RepID=RSEB_ECO57
sigma E regulatory protein MucB/RseB
Sigma-E factor regulatory protein rseB {ECO:0000313|EMBL:EOU91301.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L2_040_071G1_scaffold_379_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23314..23964)
DNA (651bp) protein (217aa)
Anti-sigma-E factor RseA n=938 Tax=Enterobacteriaceae RepID=RSEA_ECOL6
rseA; anti-RNA polymerase sigma factor SigE
Anti-sigma-E factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Regulator of SigE {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E anti-sigma factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E factor negative regulatory protein {ECO:0000256|PIRNR:PIRNR016938}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_040_071G1_scaffold_379_23
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23997..24170)
DNA (174bp) protein (58aa)
RNA polymerase sigma factor n=8 Tax=Enterobacteriaceae RepID=I5F8H7_ECOLX
rpoE; RNA polymerase sigma factor RpoE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1194150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Litchfield str.; CFSAN001076.;"
Displaying 23 items

View Taxonomy