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L2_040_071G1_scaffold_398

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_398_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..412
DNA (411bp) protein (137aa)
50S ribosomal protein L9 n=11 Tax=Citrobacter RepID=C1MBU5_9ENTR
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_040_071G1_scaffold_398_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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555..1478
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQM9_CITFR
EamA-like transporter family protein {ECO:0000313|EMBL:KEL78950.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
multidrug DMT transporter
L2_040_071G1_scaffold_398_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1508..2158)
DNA (651bp) protein (217aa)
Cell envelope opacity-associated protein a n=4 Tax=Citrobacter RepID=J1G0E2_9ENTR
Opacity-associated protein A {ECO:0000313|EMBL:ETX71882.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_071G1_scaffold_398_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2330..2998
DNA (669bp) protein (223aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
fklB; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=7 Tax=Citrobacter RepID=J0LW79_9ENTR
L2_040_071G1_scaffold_398_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3307..4716
DNA (1410bp) protein (470aa)
Amino acid permease n=6 Tax=Citrobacter RepID=J1G066_9ENTR
D-serine/D-alanine/glycine transporter {ECO:0000313|EMBL:ETX71884.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
amino acid permease
L2_040_071G1_scaffold_398_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4800..5462)
DNA (663bp) protein (221aa)
Iron-sulfur cluster repair protein YtfE n=8 Tax=Citrobacter RepID=G9SF11_CITFR
Iron-sulfur cluster repair protein YtfE {ECO:0000256|HAMAP-Rule:MF_01606, ECO:0000256|SAAS:SAAS00010490}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
iron-sulfur cluster repair di-iron protein
L2_040_071G1_scaffold_398_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5708..7261
DNA (1554bp) protein (518aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3CIK4_CITFR
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:KEL78945.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
chemotaxis protein
L2_040_071G1_scaffold_398_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7325..8290)
DNA (966bp) protein (322aa)
Transmembrane subunit n=5 Tax=Citrobacter RepID=J1G0D8_9ENTR
Inner membrane protein ytfF {ECO:0000313|EMBL:ETX71887.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_071G1_scaffold_398_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8367..9191)
DNA (825bp) protein (275aa)
Transcriptional regulator n=5 Tax=Citrobacter RepID=J0LW74_9ENTR
AraC family transcriptional regulator {ECO:0000313|EMBL:ETX71888.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
AraC family transcriptional regulator
L2_040_071G1_scaffold_398_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9273..10121)
DNA (849bp) protein (283aa)
Quinone oxidoreductase 2 {ECO:0000313|EMBL:KEL78942.1}; EC=1.6.5.2 {ECO:0000313|EMBL:KEL78942.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
NAD(P)H:quinone oxidoreductase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS61_CITFR
quinone oxidoreductase
L2_040_071G1_scaffold_398_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10206..10592
DNA (387bp) protein (129aa)
Transcriptional regulator n=3 Tax=Citrobacter RepID=J0M2J0_9ENTR
Redox-sensing transcriptional regulator QorR {ECO:0000313|EMBL:CDL39684.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
HxlR family transcriptional regulator
L2_040_071G1_scaffold_398_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10690..12633)
DNA (1944bp) protein (648aa)
2', 3'-cyclic nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:KJC07785.1}; EC=3.1.3.6 {ECO:0000313|EMBL:KJC07785.1};; EC=3.1.4.16 {ECO:0000313|EMBL:KJC07785.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase (EC:3.1.3.6 3.1.4.16)
2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase n=1 Tax=Citrobacter sp. KTE30 RepID=R8V1P6_9ENTR
L2_040_071G1_scaffold_398_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12822..13562
DNA (741bp) protein (247aa)
PAPS 3',5'-bisphosphate nucleotidase n=6 Tax=Citrobacter RepID=J1G0D3_9ENTR
3'(2'),5'-bisphosphate nucleotidase CysQ {ECO:0000313|EMBL:ETX71892.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
adenosine-3'(2'),5'-bisphosphate nucleotidase
L2_040_071G1_scaffold_398_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13552..14109)
DNA (558bp) protein (186aa)
Transcriptional regulator n=6 Tax=Citrobacter RepID=J0LW70_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL78938.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_040_071G1_scaffold_398_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14438..14644
DNA (207bp) protein (69aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=C1MBV9_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETX71894.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_071G1_scaffold_398_16
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14711..16051)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=D4BFR2_9ENTR
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:GAL46792.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_040_071G1_scaffold_398_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16326..16964)
DNA (639bp) protein (213aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=4 Tax=Citrobacter RepID=J0VNU8_9ENTR
L2_040_071G1_scaffold_398_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17177..18910
DNA (1734bp) protein (578aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1MBW2_9ENTR
Outer membrane protein {ECO:0000313|EMBL:ETX71905.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_040_071G1_scaffold_398_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18907..22683
DNA (3777bp) protein (1259aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWW0_CITFR
Translocation and assembly module TamB {ECO:0000313|EMBL:KJC13708.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_071G1_scaffold_398_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22686..23030
DNA (345bp) protein (115aa)
Gamma-glutamylcyclotransferase ytfP n=10 Tax=Enterobacteriaceae RepID=C1MBW4_9ENTR
gamma-glutamylcyclotransferase
Gamma-glutamylcyclotransferase {ECO:0000313|EMBL:AHY11591.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_040_071G1_scaffold_398_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23135..23386)
DNA (252bp) protein (84aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=11 Tax=Citrobacter RepID=D4BFR9_9ENTR
Displaying 21 items

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