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L2_040_071G1_scaffold_500

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_071G1_scaffold_500_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..456)
DNA (456bp) protein (152aa)
50S ribosomal protein L3 n=1 Tax=Escherichia coli TW07509 RepID=U0MBQ9_ECOLX
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
L2_040_071G1_scaffold_500_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(489..800)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1436 Tax=Enterobacteriaceae RepID=RS10_ECO24
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L2_040_071G1_scaffold_500_3

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863..1069
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ19021.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_071G1_scaffold_500_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1038..1457)
DNA (420bp) protein (140aa)
Calcium-binding protein required for initiation of chromosome replication n=71 Tax=Escherichia coli RepID=J7R6K1_ECOLX
pioO; chromosome replication protein PioO
Protein PioO {ECO:0000313|EMBL:ESA68257.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L2_040_071G1_scaffold_500_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1459..2928)
DNA (1470bp) protein (490aa)
Putative general secretion pathway protein A n=158 Tax=Escherichia RepID=GSPA_ECOLI
peptidoglycan-binding domain 1 protein
Putative general secretion pathway protein A {ECO:0000313|EMBL:EMX35788.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L2_040_071G1_scaffold_500_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3108..3923
DNA (816bp) protein (272aa)
Putative type II secretion system protein C n=183 Tax=Escherichia RepID=GSPC_ECOLI
gspC; general secretory pathway component, cryptic
General secretion pathway protein {ECO:0000313|EMBL:EKJ80708.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_040_071G1_scaffold_500_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3907..5859
DNA (1953bp) protein (651aa)
Type II secretion system protein D n=2 Tax=Escherichia coli RepID=L2VF34_ECOLX
Type II secretion system protein D {ECO:0000313|EMBL:ELC14101.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
general secretion pathway protein D
L2_040_071G1_scaffold_500_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5869..7350
DNA (1482bp) protein (494aa)
Putative type II secretion system protein E n=135 Tax=Escherichia RepID=GSPE_ECOLI
gspE; general secretory pathway component, cryptic
Type II secretion system protein E {ECO:0000313|EMBL:KEN90046.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_040_071G1_scaffold_500_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7347..8543
DNA (1197bp) protein (399aa)
Putative type II secretion system protein F n=156 Tax=Escherichia RepID=GSPF_ECOLI
general secretion pathway protein F
Type II secretion system protein F {ECO:0000313|EMBL:EMX27895.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L2_040_071G1_scaffold_500_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8553..8990
DNA (438bp) protein (146aa)
Putative type II secretion system protein G n=173 Tax=Enterobacteriaceae RepID=GSPG_ECOLI
general secretion pathway protein G
Type II secretion system protein G {ECO:0000313|EMBL:KDZ40451.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L2_040_071G1_scaffold_500_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8998..9507
DNA (510bp) protein (170aa)
General secretion pathway protein H n=52 Tax=Escherichia coli RepID=A8A5D4_ECOHS
general secretion pathway protein H
General secretion pathway protein H {ECO:0000313|EMBL:EKJ80703.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_040_071G1_scaffold_500_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9504..9881
DNA (378bp) protein (126aa)
Putative type II secretion system protein I n=226 Tax=Escherichia RepID=GSPI_ECOLI
gspI; general secretory pathway component, cryptic
Type II secretion system protein I {ECO:0000313|EMBL:KEN87477.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L2_040_071G1_scaffold_500_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9874..10461
DNA (588bp) protein (196aa)
Putative type II secretion system protein J n=194 Tax=Escherichia RepID=GSPJ_ECOLI
general secretion pathway protein J
Type II secretion system protein J {ECO:0000313|EMBL:ELD96062.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L2_040_071G1_scaffold_500_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10454..11437
DNA (984bp) protein (328aa)
Putative type II secretion system protein K n=199 Tax=Escherichia RepID=GSPK_ECOLI
gspK1; general secretion pathway protein K
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L2_040_071G1_scaffold_500_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11452..12615
DNA (1164bp) protein (388aa)
Putative type II secretion system protein L n=120 Tax=Escherichia RepID=GSPL_ECOLI
general secretory pathway component, cryptic
Type II secretion system protein L {ECO:0000256|PIRNR:PIRNR015761}; Short=T2SS protein L {ECO:0000256|PIRNR:PIRNR015761};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_040_071G1_scaffold_500_16
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12612..13073
DNA (462bp) protein (154aa)
Putative type II secretion system protein M n=207 Tax=Enterobacteriaceae RepID=GSPM_ECOLI
gspM; general secretion pathway protein M
General secretion pathway, M family protein {ECO:0000313|EMBL:EGI91048.1}; TaxID=766142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 155-74.;"
L2_040_071G1_scaffold_500_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13073..13750
DNA (678bp) protein (226aa)
Leader peptidase, integral membrane protein n=174 Tax=Escherichia RepID=J7QWJ0_ECOLX
type 4 prepilin-like proteins leader peptide-processing enzyme
Peptidase, A24 type IV prepilin peptidase family protein {ECO:0000313|EMBL:EII44493.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L2_040_071G1_scaffold_500_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13779..14255)
DNA (477bp) protein (159aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
Bacterioferritin n=604 Tax=Enterobacteriaceae RepID=BFR_ECOL6
bacterioferritin
L2_040_071G1_scaffold_500_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14327..14521)
DNA (195bp) protein (65aa)
Bacterioferritin-associated ferredoxin n=615 Tax=Enterobacteriaceae RepID=BFD_ECOL6
bfd; bacterioferritin-associated ferredoxin
Bacterioferritin-associated ferredoxin {ECO:0000313|EMBL:ESA68272.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L2_040_071G1_scaffold_500_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14690..17383)
DNA (2694bp) protein (898aa)
chiA; periplasmic endochitinase (EC:3.2.1.14 3.2.1.17)
Periplasmic endochitinase n=2 Tax=Escherichia coli RepID=L2VGY9_ECOLX
Periplasmic endochitinase {ECO:0000313|EMBL:ELC14114.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_071G1_scaffold_500_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17675..17779)
DNA (105bp) protein (35aa)
Elongation factor Tu n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO RepID=K4SUQ6_KLEPN
hypothetical protein
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
Displaying 21 items

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